RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 K7ERI5 159 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 NDUFS8O00217 210 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 CHP2O43745 196 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 CIDEAO60543 219 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC25A27O95847 323 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ACAA1P09110 424 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC35E2BP0CK96 405 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TACR2P21452 398 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 IGFBP5P24593 272 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 HOXA6P31267 233 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 MTNR1AP48039 350 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ABATP80404 500 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR17Q13304 367 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PDE7AQ13946 482 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 KRT33BQ14525 404 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 RTP5Q14D33 572 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 LGALSLQ3ZCW2 172 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GXYLT1Q4G148 440 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 C9orf50Q5SZB4 431 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 KIAA1161Q6NSJ0 714 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 RHOUQ7L0Q8 258 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TRMT1LQ7Z2T5 733 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ADGRD2Q7Z7M1 963 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM179BQ7Z7N9 219 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ADHFE1Q8IWW8 467 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 CENPLQ8N0S6 344 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 DTWD1Q8N5C7 304 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 LRRC17Q8N6Y2 441 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PEBP4Q96S96 227 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF607Q96SK3 696 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZBTB18Q99592 522 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR22Q99680 433 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM213AQ9BRX8 229 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 COPS4Q9BT78 406 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PAPOLGQ9BWT3 736 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF436Q9C0F3 470 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SPATC1LQ9H0A9 340 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SIRPDQ9H106 197 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FOLH1BQ9HBA9 442 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 APOBEC3GQ9HC16 384 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SDR39U1Q9NRG7 319 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 MIOSQ9NXC5 875 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ABI3Q9P2A4 366 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ERVK-19Q9WJR5 959 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PKP3Q9Y446 797 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 LNP1A1A4G5 178 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 MTMR11A4FU01 709 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM74A7A6NL05 159 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SCAMP2O15127 329 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 HPGDSO60760 199 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 WBP4O75554 376 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ATP6AP2O75787 350 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 EIF3GO75821 320 aaKnown RBP eCLIP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TOX4O94842 621 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 CSTAP01040 98 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 IGHV2-70P01814 119 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FGF2P09038 288 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 LHCGRP22888 699 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PRPH2P23942 346 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ADMP35318 185 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ATP5C1P36542 298 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SHC2P98077 582 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 EMX2Q04743 252 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 OLIG2Q13516 323 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 KYAT1Q16773 422 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM74A3Q4VXF1 159 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 NHLRC3Q5JS37 347 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FUT10Q6P4F1 479 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC39A4Q6P5W5 647 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 C19orf48Q6RUI8 117 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 EIF3MQ7L2H7 374 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GLCCI1Q86VQ1 547 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GPD1LQ8N335 351 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 OR1M1Q8NGA1 313 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 OR2T4Q8NH00 348 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 MBD3L2Q8NHZ7 208 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SFT2D1Q8WV19 159 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GTF3AQ92664 365 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF583Q96ND8 569 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR78Q96P69 363 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 BBS4Q96RK4 519 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GFM1Q96RP9 751 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TRIB1Q96RU8 372 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 OMDQ99983 421 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TRIM62Q9BVG3 475 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PTDSS2Q9BVG9 487 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ELOVL1Q9BW60 279 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 BARHL1Q9BZE3 327 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 POLR3FQ9H1D9 316 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 AKTIPQ9H8T0 292 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 EQTNQ9NQ60 294 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SPG21Q9NZD8 308 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A096LPI6 279 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 IQCMA0A1B0GVH7 501 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM240BA0A1B0GVZ2 78 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 C9JVG2 144 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 HCN1O60741 890 aa6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 EEDO75530 441 aaKnown RBP6.27□□□□□ -1.41
TSPAN3-209ENST00000560715 STC2O76061 302 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms