RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 GSNP06396 782 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.6
SLIRP-211ENST00000557623 CPN1P15169 458 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 CDKN2CP42773 168 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 GFRA1P56159 465 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 NUP107P57740 925 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 HPCAP84074 193 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 PMPCAQ10713 525 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 RCAN2Q14206 197 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF630Q2M218 657 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-211ENST00000557623 TIGD2Q4W5G0 525 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 KLHL26Q53HC5 615 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 TNFAIP8L2Q6P589 184 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-211ENST00000557623 RNF130Q86XS8 419 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 MARVELD2Q8N4S9 558 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 GATSQ8NAP1 163 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 PHOSPHO1Q8TCT1 267 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 C1GALT1C1Q96EU7 318 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
SLIRP-211ENST00000557623 WDYHV1Q96HA8 205 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 PIGQQ9BRB3 760 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 NMUR2Q9GZQ4 415 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 LIPT1Q9Y234 373 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 RPH3AQ9Y2J0 694 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-211ENST00000557623 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
SLIRP-211ENST00000557623 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-211ENST00000557623 PCNX1Q96RV3 2341 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 A0A0G2JND7 137 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 C17orf51A8MQB3 221 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 B4DXG7 233 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 EPPINO95925 133 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 GLI4P10075 376 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 PEPDP12955 493 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 NCF2P19878 526 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-211ENST00000557623 CHRNB4P30926 498 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 CASP9P55211 416 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 SUMO3P55854 103 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-211ENST00000557623 GPR68Q15743 365 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 BCL2A1Q16548 175 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 C6orf10Q5SRN2 563 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 RAET1LQ5VY80 246 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 METTL21CQ5VZV1 264 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 RTL6Q6ICC9 239 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 NCCRP1Q6ZVX7 275 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-211ENST00000557623 LACC1Q8IV20 430 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 B4GALNT2Q8NHY0 566 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 RFWD2Q8NHY2 731 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 ZPLD1Q8TCW7 415 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 ZFP90Q8TF47 636 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 CA5BP1Q8WTZ4 195 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 RAB8BQ92930 207 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 VPS33AQ96AX1 596 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 ROPN1LQ96C74 230 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 SPDL1Q96EA4 605 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 CCDC134Q9H6E4 229 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 MRGBPQ9NV56 204 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 CCDC167Q9P0B6 97 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 STOML1Q9UBI4 398 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 WDR45Q9Y484 360 aa11.32□□□□□ -0.6
SLIRP-211ENST00000557623 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 NPIPA5A0A0B4J1W7 369 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 CD8B2A6NJW9 211 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 NPIPA7E9PJI5 369 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 H0Y3Z8 333 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 GTPBP1O00178 669 aaKnown RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 HMGN4O00479 90 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 NR5A2O00482 541 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 HCRTR2O43614 444 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 GMFGO60234 142 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 NPIPA8P0DM63 369 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF17P17021 662 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 TCEA1P23193 301 aaKnown RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 TIMP3P35625 211 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 LHX2P50458 406 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 P2RX1P51575 399 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF41P51814 821 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 EEFSECP57772 596 aaKnown RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 GUCY1A3Q02108 690 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 CD226Q15762 336 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF141Q15928 474 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 ACSF3Q4G176 576 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 AGKQ53H12 422 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 DCST1Q5T197 706 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 RIPPLY2Q5TAB7 128 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 AP1ARQ63HQ0 302 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 DNAJC14Q6Y2X3 702 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 FUNDC1Q8IVP5 155 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms