RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 APEHP13798 732 aaKnown RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 HK1P19367 917 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GRK2P25098 689 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GGT5P36269 586 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 EFNA4P52798 201 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GAS1P54826 345 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 CDH11P55287 796 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 ACTG1P63261 375 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 IRF9Q00978 393 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 LSAMPQ13449 338 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GGTLC2Q14390 218 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 TSC22D1Q15714 1073 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 TBCCQ15814 346 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 SEL1L2Q5TEA6 688 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 KHDRBS2Q5VWX1 349 aaKnown RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 RAET1LQ5VY80 246 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 ANKRD22Q5VYY1 191 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 MRM1Q6IN84 353 aaKnown RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 MFSD12Q6NUT3 480 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GABRG1Q8N1C3 465 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF619Q8N2I2 560 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 NKAPQ8N5F7 415 aaKnown RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GBP7Q8N8V2 638 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 MCUQ8NE86 351 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 SEMA6DQ8NFY4 1073 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 OR4K17Q8NGC6 315 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 KAT2AQ92830 837 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 UBE2E3Q969T4 207 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 TMBIM1Q969X1 311 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 RGMAQ96B86 450 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 CMTM7Q96FZ5 175 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 RADILQ96JH8 1075 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 COL21A1Q96P44 957 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 HBEGFQ99075 208 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 ITPAQ9BY32 194 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 FUT8Q9BYC5 575 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 PRRG4Q9BZD6 226 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 OR51B5Q9H339 312 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 FOLH1BQ9HBA9 442 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 XAB2Q9HCS7 855 aaKnown RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 GLRX2Q9NS18 164 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 FBXO34Q9NWN3 711 aa6.06□□□□□ -1.44
ATXN3-236ENST00000556220 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-236ENST00000556220 IGHV4-61A0A0C4DH41 118 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 OR2M5A3KFT3 312 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 NCF1BA6NI72 391 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 NCF1CA8MVU1 366 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 FAM157AC9JC47 383 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 E7EQL1 145 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 H3BML4 177 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 H7C417 338 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 PLPP1O14494 284 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 TAPBPO15533 448 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 TMPRSS11DO60235 418 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 BANF1O75531 89 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 GCM2O75603 506 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 REM1O75628 298 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 STK16O75716 305 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 IPO7O95373 1038 aaKnown RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 CTAGE8P0CG41 777 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 NR2F6P10588 404 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 NCF1P14598 390 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 NT5EP21589 574 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 DRD5P21918 477 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 IL32P24001 234 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 PIK3R1P27986 724 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 SERPINB1P30740 379 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 ECI1P42126 302 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 NR4A2P43354 598 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 MAGEA3P43357 314 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 PPICP45877 212 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 XKP51811 444 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 ARFIP1P53367 373 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 IRF8Q02556 426 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 MAP4K2Q12851 820 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 EFR3AQ14156 821 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 E2F2Q14209 437 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 SLMAPQ14BN4 828 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 TSNQ15631 228 aaKnown RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 TRIP13Q15645 432 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 FAM45BPQ6NSW5 357 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 WDR93Q6P2C0 686 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 MED27Q6P2C8 311 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 FRA10AC1Q70Z53 315 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 GALNT7Q86SF2 657 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 CNTN4Q8IWV2 1026 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 CTAGE4Q8IX94 777 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 LAS2Q8IYD9 372 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 MUC15Q8N387 334 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 TCAIMQ8N3R3 496 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 FADS6Q8N9I5 356 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 SNX31Q8N9S9 440 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 OR4K14Q8NGD5 310 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 OR52B6Q8NGF0 335 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 OR5M1Q8NGP8 315 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 FAM45AQ8TCE6 357 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 FAM216AQ8WUB2 273 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 RNF138Q8WVD3 245 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 DVL3Q92997 716 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms