RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SLC25A43Q8WUT9 341 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 ALG8Q9BVK2 526 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 OR51E2Q9H255 320 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 ACAD8Q9UKU7 415 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CBLCQ9ULV8 474 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NUP188Q5SRE5 1749 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NSG1A0A0A6YYJ2 146 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 A0A1W2PPH5 198 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 PRSS38A1L453 326 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 MRPL3P09001 348 aaKnown RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 MAOAP21397 527 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CNR2P34972 360 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 EPHA4P54764 986 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CATR1Q13166 79 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 HENMT1Q5T8I9 393 aaKnown RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 C22orf42Q6IC83 251 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 RPL22L1Q6P5R6 122 aaKnown RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SPATC1Q76KD6 591 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 GPR149Q86SP6 731 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 RDH10Q8IZV5 341 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 OR8J2Q8NGG1 315 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TBC1D15Q8TC07 691 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 RSC1A1Q92681 617 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 ARL11Q969Q4 196 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 MUCL1Q96DR8 90 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SLC46A1Q96NT5 459 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SLC6A7Q99884 636 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SLC39A1Q9NY26 324 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NKX1-2Q9UD57 310 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 A0A087WUU8 490 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 A0A1B0GTW7 788 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 FAM230AA0A1W2PPH8 454 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 MROH6A6NGR9 719 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NPIPB15A6NHN6 443 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 C4orf47A7E2U8 309 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 AMY2AP04746 511 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SERPINA5P05154 406 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CPMP14384 443 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NFYAP23511 347 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NR4A2P43354 598 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CSNK2A3Q8NEV1 391 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 OR5K2Q8NHB8 316 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TRIM43Q96BQ3 446 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SLC39A13Q96H72 371 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 TSNAXQ99598 290 aaKnown RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 CMSS1Q9BQ75 279 aaKnown RBP10.09□□□□□ -0.79
ACTN1-216ENST00000556083 NUDT9Q9BW91 350 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 SLC6A20Q9NP91 592 aa10.09□□□□□ -0.79
ACTN1-216ENST00000556083 OR6C65A6NJZ3 312 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 TIMP2P16035 220 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 SDC1P18827 310 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CD68P34810 354 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 VIPR2P41587 438 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 SLC35A1P78382 337 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ARG2P78540 354 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 MLLT11Q13015 90 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 PLBD1Q6P4A8 553 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 MMP21Q8N119 569 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM178AQ8NBL3 297 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 OR52E1Q8NGJ3 308 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 SORCS1Q8WY21 1168 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 MAL2Q969L2 176 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ARL6Q9H0F7 186 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CLMPQ9H6B4 373 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 EME2A4GXA9 379 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 GAPDHSO14556 408 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 UBBP0CG47 229 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 UBCP0CG48 685 aaKnown RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ARAFP10398 606 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 GLULP15104 373 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 POU3F2P20265 443 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ETV4P43268 484 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CD300LGQ6UXG3 332 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF695Q8IW36 515 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 EID2Q8N6I1 236 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 OR4K13Q8NH42 304 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CNIH3Q8TBE1 160 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 KCNE4Q8WWG9 221 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 JPH3Q8WXH2 748 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 COG8Q96MW5 612 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 SLC19A3Q9BZV2 496 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 HIPK2Q9H2X6 1198 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 BCAS3Q9H6U6 928 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 C1GALT1Q9NS00 363 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 TEX10Q9NXF1 929 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CA14Q9ULX7 337 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CNMDO75829 334 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 C1orf105O95561 183 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 OR8U9P0C7N5 309 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 RRAS2P62070 204 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 TSPAN31Q12999 210 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 EIF2B1Q14232 305 aaKnown RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 BCL7AQ4VC05 210 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 KCTD11Q693B1 232 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF551Q7Z340 670 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 LRRC28Q86X40 367 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 GATSQ8NAP1 163 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 CHST14Q8NCH0 376 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms