RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CIARTQ8N365 385 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-208ENST00000553370 METTL25Q8N6Q8 603 aa8.9□□□□□ -0.98
ACTN1-208ENST00000553370 GTPBP3Q969Y2 492 aaKnown RBP8.9□□□□□ -0.98
ACTN1-208ENST00000553370 L3HYPDHQ96EM0 354 aa8.9□□□□□ -0.98
ACTN1-208ENST00000553370 SH3YL1Q96HL8 342 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-208ENST00000553370 GMPPAQ96IJ6 420 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-208ENST00000553370 AMDHD1Q96NU7 426 aa8.9□□□□□ -0.98
ACTN1-208ENST00000553370 TMEM185BQ9H7F4 350 aa8.9□□□□□ -0.98
ACTN1-208ENST00000553370 PSMC3IPQ9P2W1 217 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-208ENST00000553370 TBK1Q9UHD2 729 aa8.9□□□□□ -0.98
ACTN1-208ENST00000553370 STAB1Q9NY15 2570 aa8.9□□□□□ -0.99
ACTN1-208ENST00000553370 A0A087WZY1 265 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 GXYLT2A0PJZ3 443 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 INAFM1C9JVW0 142 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 UPK1AO00322 258 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 SCDO00767 359 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 TNFSF11O14788 317 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 CLOCKO15516 846 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 CXCL13O43927 109 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 AQP8O94778 261 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 CNOT4O95628 575 aaKnown RBP8.89□□□□□ -0.99
ACTN1-208ENST00000553370 CHEK2O96017 543 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 OPN1LWP04000 364 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 TP53P04637 393 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-208ENST00000553370 TUBBP07437 444 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 SBK3P0C264 359 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 PABPC4LP0CB38 370 aaKnown RBP8.89□□□□□ -0.99
ACTN1-208ENST00000553370 PRPS2P11908 318 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 DDX5P17844 614 aaKnown RBP8.89□□□□□ -0.99
ACTN1-208ENST00000553370 IL32P24001 234 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 PCYT1AP49585 367 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 NAA20P61599 178 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 VEZF1Q14119 521 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 RPS26P11Q5JNZ5 115 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-208ENST00000553370 HBMQ6B0K9 141 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 GTF2IRD2BQ6EKJ0 949 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 GALNT18Q6P9A2 607 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 BEND4Q6ZU67 534 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 GTF2IRD2Q86UP8 949 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 OR2L13Q8N349 312 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 COX18Q8N8Q8 333 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 OR10D3Q8NH80 312 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 CEP70Q8NHQ1 597 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 FAM76AQ8TAV0 307 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 PIK3R3Q92569 461 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 PPCDCQ96CD2 204 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 ELP4Q96EB1 424 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 ARSGQ96EG1 525 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 PLPPR2Q96GM1 343 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 MS4A4EQ96PG1 132 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 ACTR6Q9GZN1 396 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 GLIPR2Q9H4G4 154 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 TIGARQ9NQ88 270 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 WBP11Q9Y2W2 641 aaKnown RBP8.89□□□□□ -0.99
ACTN1-208ENST00000553370 FIS1Q9Y3D6 152 aa8.89□□□□□ -0.99
ACTN1-208ENST00000553370 H3BQF6 201 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 RGS14O43566 566 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 AKAP10O43572 662 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 GLRA3O75311 464 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 RSL1D1O76021 490 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ABHD2P08910 425 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ALOX5P09917 674 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ATP6V1C1P21283 382 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 SFTPDP35247 375 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 HPCAL1P37235 193 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 MANFP55145 182 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 RPS4XP62701 263 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 RPS26P62854 115 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 PRR5P85299 388 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 OCRLQ01968 901 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 SLC29A2Q14542 456 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 GLE1Q53GS7 698 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 TMEM201Q5SNT2 666 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 FAM71E1Q6IPT2 247 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ANKRD26P1Q6NSI1 321 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 NOXRED1Q6NXP6 359 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ESPNLQ6ZVH7 1005 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 TRMT10CQ7L0Y3 403 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ZNF551Q7Z340 670 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 CNPY4Q8N129 248 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 TMCO5AQ8N6Q1 288 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 CDRT4Q8N9R6 151 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 NOA1Q8NC60 698 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 NUP43Q8NFH3 380 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 STEAP2Q8NFT2 490 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 OR2V1Q8NHB1 315 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ACMSDQ8TDX5 336 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 RNF138Q8WVD3 245 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ZBTB8AQ96BR9 441 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 ZBED6CLQ96FA7 236 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 RNF145Q96MT1 663 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 LMF2Q9BU23 707 aaKnown RBP8.88□□□□□ -0.99
ACTN1-208ENST00000553370 GSTO2Q9H4Y5 243 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 NGBQ9NPG2 151 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 GLRX2Q9NS18 164 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 SH3BP4Q9P0V3 963 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 DCDC2Q9UHG0 476 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 SNX8Q9Y5X2 465 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 FBN3Q75N90 2809 aa8.88□□□□□ -0.99
ACTN1-208ENST00000553370 SMIM23A6NLE4 172 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms