RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 TUBBP07437 444 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 NGFRP08138 427 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 IFI6P09912 130 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 ACP2P11117 423 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 PRPS2P11908 318 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 RAC1P63000 192 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 DMTNQ08495 405 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 GLE1Q53GS7 698 aaKnown RBP11.21□□□□□ -0.61
LETMD1-222ENST00000550274 ZNF385BQ569K4 471 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 CPTPQ5TA50 214 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 HBMQ6B0K9 141 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 ADAM5Q6NVV9 412 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 IKBIPQ70UQ0 350 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 STK32CQ86UX6 486 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 LCA5Q86VQ0 697 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 GABRG1Q8N1C3 465 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 SLC16A11Q8NCK7 471 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 ABHD3Q8WU67 409 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 ROBO4Q8WZ75 1007 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 ZBTB8AQ96BR9 441 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 OTUB1Q96FW1 271 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-222ENST00000550274 OR10A4Q9H209 315 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 FANCFQ9NPI8 374 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 GLRX2Q9NS18 164 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 EMCNQ9ULC0 261 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 CCL27Q9Y4X3 112 aa11.21□□□□□ -0.61
LETMD1-222ENST00000550274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■□□ 15.9
LETMD1-222ENST00000550274 TTC36A6NLP5 189 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 G3V2L1 256 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 CLOCKO15516 846 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 PDPK1O15530 556 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 RSL1D1O76021 490 aaKnown RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 KCNK2O95069 426 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 DANCRP0C864 163 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 GPC1P35052 558 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 SFTPDP35247 375 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 CDKN1AP38936 164 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 ZNF41P51814 821 aaPredicted RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 PRKAG1P54619 331 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 KIAA0040Q15053 153 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 TAB1Q15750 504 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 CD226Q15762 336 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 ZNF239Q16600 458 aaKnown RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 DUSP5Q16690 384 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 HEPHL1Q6MZM0 1159 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 SEZ6L2Q6UXD5 910 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 TFAP2EQ6VUC0 442 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 NUFIP2Q7Z417 695 aaKnown RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 ZNF619Q8N2I2 560 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 MMGT1Q8N4V1 131 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 CDRT4Q8N9R6 151 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 STEAP2Q8NFT2 490 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 FAM76AQ8TAV0 307 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 FAM110BQ8TC76 370 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 ACTRT2Q8TDY3 377 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 OSTF1Q92882 214 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 KLHL15Q96M94 604 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 TACO1Q9BSH4 297 aaKnown RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 SRXN1Q9BYN0 137 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 WBP11Q9Y2W2 641 aaKnown RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 MAGED1Q9Y5V3 778 aaPredicted RBP11.2□□□□□ -0.62
LETMD1-222ENST00000550274 PTGDR2Q9Y5Y4 395 aa11.2□□□□□ -0.62
LETMD1-222ENST00000550274 MALRD1Q5VYJ5 2156 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 NPIPB8E9PQR5 432 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 EFNA2O43921 213 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 URI1O94763 535 aaPredicted RBP11.19□□□□□ -0.62
LETMD1-222ENST00000550274 ABHD2P08910 425 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 LINGO3P0C6S8 592 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 ME2P23368 584 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 ACVR1BP36896 505 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 PRIM2P49643 509 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 FOXF1Q12946 379 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 VPS26BQ4G0F5 336 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 CCNJQ5T5M9 372 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 FRMD7Q6ZUT3 714 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 SZRD1Q7Z422 152 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 TRABD2AQ86V40 505 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 TUSC5Q8IXB3 177 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 LILRA2Q8N149 483 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 NUP43Q8NFH3 380 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 MZB1Q8WU39 189 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 C16orf58Q96GQ5 468 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 MS4A4EQ96PG1 132 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 NTMQ9P121 344 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 LIPT1Q9Y234 373 aa11.19□□□□□ -0.62
LETMD1-222ENST00000550274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.19□□□□□ -0.624e-11■■■■□ 22.8
LETMD1-222ENST00000550274 OIP5O43482 229 aa11.18□□□□□ -0.62
LETMD1-222ENST00000550274 AKAP10O43572 662 aa11.18□□□□□ -0.62
LETMD1-222ENST00000550274 NDUFS7O75251 213 aa11.18□□□□□ -0.62
LETMD1-222ENST00000550274 SEC22BO75396 215 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms