RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CALB2P22676 271 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 UQCRC2P22695 453 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 GPC1P35052 558 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 TIMP3P35625 211 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 PEX19P40855 299 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 PTGDSP41222 190 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 MC3RP41968 323 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 MNAT1P51948 309 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 BNIP1Q12981 228 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 GAB1Q13480 694 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
NUP188-211ENST00000550219 MMEL1Q495T6 779 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 C6orf10Q5SRN2 563 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 SLC30A6Q6NXT4 461 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 C8orf82Q6P1X6 216 aaPredicted RBP12.18□□□□□ -0.46
NUP188-211ENST00000550219 TMEM107Q6UX40 140 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 C9orf106Q8NAJ2 232 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 PCYOX1LQ8NBM8 494 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 TMBIM1Q969X1 311 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 MOAP1Q96BY2 351 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 ROPN1LQ96C74 230 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 FAM120BQ96EK7 910 aaKnown RBP12.18□□□□□ -0.46
NUP188-211ENST00000550219 RASSF1Q9NS23 344 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 SLC25A37Q9NYZ2 338 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 ZNF629Q9UEG4 869 aaPredicted RBP12.18□□□□□ -0.46
NUP188-211ENST00000550219 PRODH2Q9UF12 536 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 ST6GALNAC2Q9UJ37 374 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 CBLCQ9ULV8 474 aa12.18□□□□□ -0.46
NUP188-211ENST00000550219 TACC2O95359 2948 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 MBD3L4A6NDZ8 208 aaPredicted RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 MBD3L3A6NE82 208 aaPredicted RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 FRG2CA6NGY1 282 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 TUBAL3A6NHL2 446 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 MBD3L5A6NJ08 208 aaPredicted RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 CD8B2A6NJW9 211 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 EBAG9O00559 213 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 AIM2O14862 343 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 ACTL6AO96019 429 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 TMIGD3P0DMS9 266 aaPredicted RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 NAGAP17050 411 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 DNASE1P24855 282 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 IL12BP29460 328 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 KRT20P35900 424 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 CCT3P49368 545 aaKnown RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 CORO7P57737 925 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 NFYCQ13952 458 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 GTDC1Q4AE62 458 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 NHSL2Q5HYW2 709 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 EXOSC6Q5RKV6 272 aaKnown RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 SAXO2Q658L1 398 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 POMZP3Q6PJE2 187 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 ZNF621Q6ZSS3 439 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 DHDDSQ86SQ9 333 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 IFNEQ86WN2 208 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 CDC20BQ86Y33 519 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 MBD3L2Q8NHZ7 208 aaPredicted RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 ZFP90Q8TF47 636 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 FAM222BQ8WU58 562 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 HOXB13Q92826 284 aaPredicted RBP12.17□□□□□ -0.46
NUP188-211ENST00000550219 NINJ1Q92982 152 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 LRRC58Q96CX6 371 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 NEURL3Q96EH8 262 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 GIMAP5Q96F15 307 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 COL21A1Q96P44 957 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 CGREF1Q99674 301 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 TUBA1CQ9BQE3 449 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 C3orf14Q9HBI5 128 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 GID8Q9NWU2 228 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 VAPAQ9P0L0 249 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 DKKL1Q9UK85 242 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 NINQ8N4C6 2090 aa12.17□□□□□ -0.46
NUP188-211ENST00000550219 GSNP06396 782 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 CD99P14209 185 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 CTSSP25774 331 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 OPRM1P35372 400 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 MAP3K8P41279 467 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 PPICP45877 212 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 CPA2P48052 419 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 EMDP50402 254 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 DCAF7P61962 342 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 PRR5P85299 388 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 ZNF155Q12901 538 aaPredicted RBP12.16□□□□□ -0.46
NUP188-211ENST00000550219 POU4F3Q15319 338 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 FBXL19-AS1Q494R0 122 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 RUNDC3AQ59EK9 446 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 TMEM81Q6P7N7 255 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 ENPP6Q6UWR7 440 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 NPSR1Q6W5P4 371 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 DNAJC14Q6Y2X3 702 aaPredicted RBP12.16□□□□□ -0.46
NUP188-211ENST00000550219 LUZP2Q86TE4 346 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 GCNT2Q8N0V5 402 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 CHDHQ8NE62 594 aaPredicted RBP12.16□□□□□ -0.46
NUP188-211ENST00000550219 NUP43Q8NFH3 380 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 OR56A1Q8NGH5 318 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 TMCO6Q96DC7 493 aa12.16□□□□□ -0.46
NUP188-211ENST00000550219 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms