RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CCL21O00585 134 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 FBP2O00757 339 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 UGT2B17O75795 530 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 AGFG2O95081 481 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 CHRM4P08173 479 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 BMP2P12643 396 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 GCKP35557 465 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 CHRNEQ04844 493 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 NFYCQ13952 458 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 ZNF630Q2M218 657 aaPredicted RBP17.58■□□□□ 0.4
DDX54-207ENST00000550016 GXYLT1Q4G148 440 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 NHSL2Q5HYW2 709 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 WLSQ5T9L3 541 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 DHDDSQ86SQ9 333 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 CD163Q86VB7 1156 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 FJX1Q86VR8 437 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 ZNF614Q8N883 585 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 PMM1Q92871 262 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 C1GALT1C1Q96EU7 318 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 SLC38A1Q9H2H9 487 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 MTHFD2LQ9H903 347 aaPredicted RBP17.58■□□□□ 0.4
DDX54-207ENST00000550016 CALML5Q9NZT1 146 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 ERRFI1Q9UJM3 462 aaPredicted RBP17.58■□□□□ 0.4
DDX54-207ENST00000550016 CORO2BQ9UQ03 480 aa17.58■□□□□ 0.4
DDX54-207ENST00000550016 TMEM247A6NEH6 219 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 SERINC4A6NH21 518 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 ACTL6AO96019 429 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 TFPTP0C1Z6 253 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 BMP7P18075 431 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 HK1P19367 917 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 ADH7P40394 386 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 GNA13Q14344 377 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 GLYR1Q49A26 553 aaPredicted RBP17.57■□□□□ 0.4
DDX54-207ENST00000550016 RUNDC3AQ59EK9 446 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 EMC4Q5J8M3 183 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 VASNQ6EMK4 673 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 MTDHQ86UE4 582 aaKnown RBP17.57■□□□□ 0.4
DDX54-207ENST00000550016 IFNEQ86WN2 208 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 OR5M9Q8NGP3 310 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 B4GALNT2Q8NHY0 566 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 SLC38A5Q8WUX1 472 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 ABTB1Q969K4 478 aaPredicted RBP17.57■□□□□ 0.4
DDX54-207ENST00000550016 ZG16BQ96DA0 208 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 SH3YL1Q96HL8 342 aaPredicted RBP17.57■□□□□ 0.4
DDX54-207ENST00000550016 CGREF1Q99674 301 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 TIMP4Q99727 224 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 PNPLA3Q9NST1 481 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 ARMCX1Q9P291 453 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 TNFRSF10DQ9UBN6 386 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 BAHCC1Q9P281 2608 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 USP9XQ93008 2570 aaPredicted RBP17.57■□□□□ 0.4
DDX54-207ENST00000550016 RELNP78509 3460 aa17.57■□□□□ 0.4
DDX54-207ENST00000550016 NCOA6Q14686 2063 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 LOC100653049A0A140TA62 436 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 BBIP1A8MTZ0 92 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 HCRTR2O43614 444 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 GMFGO60234 142 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 EIF4E2O60573 245 aaKnown RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 TNFRSF21O75509 655 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 KRT34O76011 436 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 ESRRAP11474 423 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 GPX2P18283 190 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 CHMP24386 653 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 RNF144AP50876 292 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 GFRA1P56159 465 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 PER3P56645 1201 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 CRYZQ08257 329 aaKnown RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 CYLC2Q14093 348 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 MAPK11Q15759 364 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 MAPK14Q16539 360 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 MMEL1Q495T6 779 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 COQ5Q5HYK3 327 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 SNX32Q86XE0 403 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 EID3Q8N140 333 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 ANKRD27Q96NW4 1050 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 CPPED1Q9BRF8 314 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 UGT2B28Q9BY64 529 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 TP63Q9H3D4 680 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 RUBCNLQ9H714 662 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 A4GALTQ9NPC4 353 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 SUCOQ9UBS9 1254 aaKnown RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 CARD8Q9Y2G2 431 aa17.56■□□□□ 0.4
DDX54-207ENST00000550016 RPH3AQ9Y2J0 694 aaPredicted RBP17.56■□□□□ 0.4
DDX54-207ENST00000550016 A0A087WZY1 265 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 CENPVL1A0A0U1RR11 272 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 ZNF264O43296 627 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 CSTAP01040 98 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 NPPAP01160 153 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 BCHEP06276 602 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 UBL4AP11441 157 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 TCEA1P23193 301 aaKnown RBP17.55■□□□□ 0.4
DDX54-207ENST00000550016 P2RX1P51575 399 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 CRISP3P54108 245 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 B3GALT5-AS1P59052 145 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 ZNF117Q03924 483 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 FGFBP1Q14512 234 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 ZNF585AQ6P3V2 769 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 MTFR2Q6P444 385 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 AAGABQ6PD74 315 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 C3P1Q6ZMU1 363 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms