RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FOXC2Q99958 501 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 ACTRT3Q9BYD9 372 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 PARD6BQ9BYG5 372 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 PIGUQ9H490 435 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 RNF122Q9H9V4 155 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 HHATLQ9HCP6 504 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 MED17Q9NVC6 651 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 STOML1Q9UBI4 398 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 EDARQ9UNE0 448 aa14.69□□□□□ -0.06
VPS29-207ENST00000549970 FAF1Q9UNN5 650 aaPredicted RBP14.69□□□□□ -0.06
VPS29-207ENST00000549970 NPIPA5A0A0B4J1W7 369 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 NPIPA7E9PJI5 369 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 AQP8O94778 261 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 OPN1LWP04000 364 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 HRGP04196 525 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 SERPINE1P05121 402 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 NPIPA8P0DM63 369 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 PRPS1L1P21108 318 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 ATP6V1C1P21283 382 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 SOAT1P35610 550 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 RNF144AP50876 292 aaPredicted RBP14.68□□□□□ -0.06
VPS29-207ENST00000549970 ZNF41P51814 821 aaPredicted RBP14.68□□□□□ -0.06
VPS29-207ENST00000549970 MAD2L1Q13257 205 aaPredicted RBP14.68□□□□□ -0.06
VPS29-207ENST00000549970 PLPPR5Q32ZL2 321 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 ZNF474Q6S9Z5 364 aaPredicted RBP14.68□□□□□ -0.06
VPS29-207ENST00000549970 PAMR1Q6UXH9 720 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 MISPQ8IVT2 679 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 RIMKLAQ8IXN7 391 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 GTPBP8Q8N3Z3 284 aaPredicted RBP14.68□□□□□ -0.06
VPS29-207ENST00000549970 OR5AK3PQ8NH89 298 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 B4GALNT2Q8NHY0 566 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 PSMA8Q8TAA3 256 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 ADAMTS15Q8TE58 950 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 ZBTB8AQ96BR9 441 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 RNF145Q96MT1 663 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 KLHDC3Q9BQ90 382 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 DUSP26Q9BV47 211 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 PRRG4Q9BZD6 226 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 BHLHE41Q9C0J9 482 aaPredicted RBP14.68□□□□□ -0.06
VPS29-207ENST00000549970 CENPHQ9H3R5 247 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 TMEM185BQ9H7F4 350 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 NEUROD4Q9HD90 331 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 GPATCH2Q9NW75 528 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 NDRG3Q9UGV2 375 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 KCNE3Q9Y6H6 103 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 ZFHX3Q15911 3703 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 ITPR3Q14573 2671 aa14.68□□□□□ -0.06
VPS29-207ENST00000549970 A0A1W2PQD3 144 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 CASKO14936 926 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 GOSR1O95249 250 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 FCGR2AP12318 317 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 CD79BP40259 229 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 KCNJ5P48544 419 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 ABCE1P61221 599 aaKnown RBP14.67□□□□□ -0.06
VPS29-207ENST00000549970 EMX2Q04743 252 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 PGS1Q32NB8 556 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 DCST2Q5T1A1 773 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 WDR75Q8IWA0 830 aaKnown RBP14.67□□□□□ -0.06
VPS29-207ENST00000549970 OR10D3Q8NH80 312 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 PHOSPHO1Q8TCT1 267 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 SFXN5Q8TD22 340 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 ACTRT2Q8TDY3 377 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 CXXC4Q9H2H0 198 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 NOP53Q9NZM5 478 aaKnown RBP14.67□□□□□ -0.06
VPS29-207ENST00000549970 PROCRQ9UNN8 238 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 TESMINQ9Y4I5 508 aa14.67□□□□□ -0.06
VPS29-207ENST00000549970 UQCRHLA0A096LP55 91 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 BIRC5O15392 142 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 CGAP01215 116 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 RAF1P04049 648 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 KRT16P08779 473 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 POU2F1P14859 743 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 PSMA4P25789 261 aaKnown RBP14.66□□□□□ -0.06
VPS29-207ENST00000549970 SLC6A8P48029 635 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 CLDN8P56748 225 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 HBA1P69905 142 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 OCRLQ01968 901 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 ZNF117Q03924 483 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 KEAP1Q14145 624 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 FGFBP1Q14512 234 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 CEP85LQ5SZL2 805 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 CLECL1Q8IZS7 167 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 ZNF614Q8N883 585 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 ZNF610Q8N9Z0 462 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 CHDHQ8NE62 594 aaPredicted RBP14.66□□□□□ -0.06
VPS29-207ENST00000549970 OR5D16Q8NGK9 328 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 POC1BQ8TC44 478 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 MOAP1Q96BY2 351 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 ADGRG7Q96K78 797 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 C20orf27Q9GZN8 174 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 AKTIPQ9H8T0 292 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 PLEKHF2Q9H8W4 249 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 KLHL28Q9NXS3 571 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 CLEC4AQ9UMR7 237 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 C2CD3Q4AC94 2353 aa14.66□□□□□ -0.06
VPS29-207ENST00000549970 MAP1AP78559 2803 aaPredicted RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 A0A1W2PPR1 153 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 C7orf72A4D263 438 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 TNFSF11O14788 317 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 TM9SF1O15321 606 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms