RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MED17Q9NVC6 651 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 MRPS7Q9Y2R9 242 aaKnown RBP12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF593O00488 134 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-228ENST00000548938 KLF4O43474 513 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 OR1F1O43749 312 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 SSNA1O43805 119 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 RRASP10301 218 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 PAICSP22234 425 aaKnown RBP12.8□□□□□ -0.36
HDAC7-228ENST00000548938 KELP23276 732 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 NTSP30990 170 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 SSR2P43308 183 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 REEP5Q00765 189 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 CDC73Q6P1J9 531 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF793Q6ZN11 406 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ESPNLQ6ZVH7 1005 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 PLEKHM3Q6ZWE6 761 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 CEACAM19Q7Z692 300 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 OR5W2Q8NH69 310 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 POF1BQ8WVV4 589 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF764Q96H86 408 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-228ENST00000548938 COQ10AQ96MF6 247 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 HCAR1Q9BXC0 346 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 OR52A5Q9H2C5 316 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 KCMF1Q9P0J7 381 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 MAFFQ9ULX9 164 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 RNF215Q9Y6U7 377 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 G3V3Q6 166 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 TRIM77I1YAP6 450 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 KPNA3O00505 521 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 SPINT1O43278 529 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 CXCL14O95715 111 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 HRGP04196 525 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 H2AFB2P0C5Z0 115 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 C8orf89P0DMQ9 161 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 GPR1P46091 355 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 CCR8P51685 355 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 SHC2P98077 582 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 GNA13Q14344 377 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 NIPAL3Q6P499 406 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 LILRA6Q6PI73 481 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 C17orf47Q8NEP4 570 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 OR10H4Q8NGA5 316 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 OR2T35Q8NGX2 323 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 ADAMTS14Q8WXS8 1223 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 BADQ92934 168 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 AICDAQ9GZX7 198 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 DPEP2Q9H4A9 486 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 PELI2Q9HAT8 420 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 TRIM36Q9NQ86 728 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 SCML1Q9UN30 329 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 GOLGA4Q13439 2230 aaKnown RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 MYO7AQ13402 2215 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 A0A0A6YYD5 115 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 A0A1B0GVI7 797 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 SYT5O00445 386 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 SYN1P17600 705 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 ATF4P18848 351 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 NDUFV2P19404 249 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 FUT1P19526 365 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 DRD5P21918 477 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 F8A1P23610 371 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 RPL6Q02878 288 aaKnown RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 GALEQ14376 348 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 RPTNQ6XPR3 784 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 CHMP1BQ7LBR1 199 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 DCUN1D3Q8IWE4 304 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 OR4D9Q8NGE8 314 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 OR2L2Q8NH16 312 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 MACROD1Q9BQ69 325 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 TRMT61BQ9BVS5 477 aaKnown RBP12.79□□□□□ -0.36
HDAC7-228ENST00000548938 RBCK1Q9BYM8 510 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 WASH6PQ9NQA3 447 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 NLGN3Q9NZ94 848 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 PRKAG2Q9UGJ0 569 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 INSL6Q9Y581 213 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 DENND4CQ5VZ89 1909 aa12.79□□□□□ -0.36
HDAC7-228ENST00000548938 DAPL1A0PJW8 107 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 MAN2B1O00754 1011 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 PGRMC2O15173 223 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 REM1O75628 298 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 PAPLNO95428 1278 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 HPXP02790 462 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ZGLP1P0C6A0 271 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 DRD2P14416 443 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 BMP8BP34820 402 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 SELENOPP49908 381 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 RGS8P57771 180 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 DECR1Q16698 335 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 HACD4Q5VWC8 232 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 OR4C11Q6IEV9 310 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms