RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 C1orf94Q6P1W5 598 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF836Q6ZNA1 936 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 CDK20Q8IZL9 346 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SAMD12Q8N8I0 201 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM52Q8NDY8 209 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 IL17RDQ8NFM7 739 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 OR9A4Q8NGU2 314 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF486Q96H40 463 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 CD180Q99467 661 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SLC28A3Q9HAS3 691 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 DIMT1Q9UNQ2 313 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF443Q9Y2A4 671 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 NCKAP1Q9Y2A7 1128 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 RP1P56715 2156 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ADH1BP00325 375 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 CHRNB1P11230 501 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 CTSEP14091 401 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 GSTM3P21266 225 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 MYL9P24844 172 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SHC1P29353 583 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 NTSR1P30989 418 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 COX10Q12887 443 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 KRR1Q13601 381 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 E2F2Q14209 437 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ELOAQ14241 798 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF433Q8N7K0 673 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 FAM3CQ92520 227 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 GAL3ST1Q99999 423 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM246Q9BRR3 403 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 EXTL2Q9UBQ6 330 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 OR10H1Q9Y4A9 318 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 H0YGG7 62 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 GABRPO00591 440 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 HCRTR1O43613 425 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 CSF3P09919 207 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 TEAD1P28347 426 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 MAGEB1P43366 347 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ARF3P61204 181 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SUZ12Q15022 739 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF362Q5T0B9 420 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 MFSD12Q6NUT3 480 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF544Q6NX49 715 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 FBXO42Q6P3S6 717 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SDR9C7Q8NEX9 313 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 CITED4Q96RK1 184 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 TAPBPLQ9BX59 468 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 MIXL1Q9H2W2 232 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 UBQLN3Q9H347 655 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 LSM2Q9Y333 95 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 AP1M2Q9Y6Q5 423 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 V9GYH0 126 aa12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 TP53BP1Q12888 1972 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-209ENST00000548825 SHISA3A0PJX4 238 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ANKRD61A6NGH8 418 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 CENPAP49450 140 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 CRYZQ08257 329 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ILF3Q12906 894 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 TSPAN31Q12999 210 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 DSG2Q14126 1118 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 SHHQ15465 462 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 TP53I3Q53FA7 332 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 SCAIQ8N9R8 606 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ACOT11Q8WXI4 607 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 PEX11GQ96HA9 241 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 NDOR1Q9UHB4 597 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 GTF2A1LQ9UNN4 478 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 CHST2Q9Y4C5 530 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 DSPPQ9NZW4 1301 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 A0A0A6YYC8 382 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 E9PI62 339 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 I3L1I5 382 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 UGT2B7P16662 529 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 MAKP20794 623 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 TBXA2RP21731 343 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 RFX2P48378 723 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 PGGHGQ32M88 737 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 LYPD4Q6UWN0 246 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 THSD4Q6ZMP0 1018 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 FAM160A2Q8N612 972 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 RFKQ969G6 155 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 PSD2Q9BQI7 771 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ALG8Q9BVK2 526 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ANKHQ9HCJ1 492 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 PLEKHB1Q9UF11 243 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 MAU2Q9Y6X3 613 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 ABCA7Q8IZY2 2146 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
PRPF40B-209ENST00000548825 RPP14O95059 124 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms