RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PMM1Q92871 262 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 ZG16BQ96DA0 208 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 TIMP4Q99727 224 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 KLHDC3Q9BQ90 382 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 VKORC1Q9BQB6 163 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 PRDM14Q9GZV8 571 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 IKZF5Q9H5V7 419 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 PNPLA3Q9NST1 481 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 TAS2R10Q9NYW0 307 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 MEMO1Q9Y316 297 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 SLC6A5Q9Y345 797 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 WDR45Q9Y484 360 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 DSPPQ9NZW4 1301 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 USP9YO00507 2555 aaPredicted RBP17.35■□□□□ 0.37
DDX55-211ENST00000544429 OIP5O43482 229 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 SNX3O60493 162 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 DNAJA2O60884 412 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 ACTL6AO96019 429 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 TPOP07202 933 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 BMP7P18075 431 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 GPX2P18283 190 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 CHMP24386 653 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 CASP6P55212 293 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 DSTNP60981 165 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 PLAURQ03405 335 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 ZNF117Q03924 483 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 CHRNEQ04844 493 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 PTPN13Q12923 2485 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 GPR68Q15743 365 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 ZNF630Q2M218 657 aaPredicted RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 GLYR1Q49A26 553 aaPredicted RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 COQ5Q5HYK3 327 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 DCST1Q5T197 706 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 PDZK1Q5T2W1 519 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 FJX1Q86VR8 437 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 GATSQ8NAP1 163 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 PHF10Q8WUB8 498 aaKnown RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 SLC38A5Q8WUX1 472 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 ELAC2Q9BQ52 826 aaKnown RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 CPPED1Q9BRF8 314 aaPredicted RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 UGT2B28Q9BY64 529 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 TP63Q9H3D4 680 aaPredicted RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 RAD21L1Q9H4I0 556 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 PTGES2Q9H7Z7 377 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 THUMPD1Q9NXG2 353 aaKnown RBP17.34■□□□□ 0.37
DDX55-211ENST00000544429 ICAM5Q9UMF0 924 aa17.34■□□□□ 0.37
DDX55-211ENST00000544429 SPTAN1Q13813 2472 aaKnown RBP17.33■□□□□ 0.37
DDX55-211ENST00000544429 C7orf72A4D263 438 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 SERINC4A6NH21 518 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 CCL21O00585 134 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 ANGPT2O15123 496 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 AGFG2O95081 481 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 PPIBP23284 216 aaKnown RBP17.33■□□□□ 0.36
DDX55-211ENST00000544429 CRATP43155 626 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 GNGT1P63211 74 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 FGFBP1Q14512 234 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 TOMM20Q15388 145 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 GPAT3Q53EU6 434 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 RUNDC3AQ59EK9 446 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 RTL6Q6ICC9 239 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 CBLN3Q6UW01 205 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 IFNEQ86WN2 208 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 OR14L1PQ8NHC6 308 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 SSC4DQ8WTU2 575 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 CCDC120Q96HB5 630 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 EXO5Q9H790 373 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 A4GALTQ9NPC4 353 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 P2RX2Q9UBL9 471 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 SUCOQ9UBS9 1254 aaKnown RBP17.33■□□□□ 0.36
DDX55-211ENST00000544429 DKKL1Q9UK85 242 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 L3MBTL1Q9Y468 752 aa17.33■□□□□ 0.36
DDX55-211ENST00000544429 SPTBN1Q01082 2364 aaKnown RBP17.33■□□□□ 0.36
DDX55-211ENST00000544429 C15orf38-AP3S2A0A0A6YYH1 394 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 AGAP5A6NIR3 686 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 H3BNH8 94 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 WDR1O75083 606 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 NUDT7P0C024 238 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 CPN1P15169 458 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 PSMA4P25789 261 aaKnown RBP17.32■□□□□ 0.36
DDX55-211ENST00000544429 SUMO3P55854 103 aaPredicted RBP17.32■□□□□ 0.36
DDX55-211ENST00000544429 SKP2Q13309 424 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 WLSQ5T9L3 541 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 ARSKQ6UWY0 536 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 PIGWQ7Z7B1 504 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 DHDDSQ86SQ9 333 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 MARVELD2Q8N4S9 558 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 OR5M9Q8NGP3 310 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 B4GALNT2Q8NHY0 566 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 PHOSPHO1Q8TCT1 267 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 ABTB1Q969K4 478 aaPredicted RBP17.32■□□□□ 0.36
DDX55-211ENST00000544429 ARSGQ96EG1 525 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 WDYHV1Q96HA8 205 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 ANKRD27Q96NW4 1050 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 CGREF1Q99674 301 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 MYLK2Q9H1R3 596 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 MTHFD2LQ9H903 347 aaPredicted RBP17.32■□□□□ 0.36
DDX55-211ENST00000544429 SH3BGRL2Q9UJC5 107 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 ACAD8Q9UKU7 415 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 FAM215AQ9Y5M1 114 aa17.32■□□□□ 0.36
DDX55-211ENST00000544429 A0A087WZY1 265 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms