RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 BARHL1Q9BZE3 327 aa7.49□□□□□ -1.21
PDLIM5-221ENST00000542407 UNKLQ9H9P5 680 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-221ENST00000542407 RDH8Q9NYR8 311 aa7.49□□□□□ -1.21
PDLIM5-221ENST00000542407 PSORS1C1Q9UIG5 152 aa7.49□□□□□ -1.21
PDLIM5-221ENST00000542407 U3KQ87 197 aa7.49□□□□□ -1.21
PDLIM5-221ENST00000542407 IGLON5A6NGN9 336 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 CLCA1A8K7I4 914 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 M0R3H8 397 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC16A8O95907 504 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC2A4P14672 509 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 HNF1AP20823 631 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 CPN2P22792 545 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 HLA-DMAP28067 261 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 RORCP51449 518 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 ASAH1Q13510 395 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 AGTRAPQ6RW13 159 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 VTCN1Q7Z7D3 282 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 THOC6Q86W42 341 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 GPALPP1Q8IXQ4 340 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 LRRC56Q8IYG6 542 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 DENND6BQ8NEG7 585 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 OR8J3Q8NGG0 315 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 OR2L2Q8NH16 312 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 WDR20Q8TBZ3 569 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 RSC1A1Q92681 617 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 TNFRSF14Q92956 283 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF514Q96K75 400 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 CCDC115Q96NT0 180 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 COL21A1Q96P44 957 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 GABRG3Q99928 467 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 LGR4Q9BXB1 951 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 OR51V1Q9H2C8 321 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 LRTM1Q9HBL6 345 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 PISDQ9UG56 409 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF222Q9UK12 451 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 PPT2Q9UMR5 302 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 CMAHPQ9Y471 501 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SERTM2A0A1B0GWG4 89 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 E7EQ34 232 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 EIF1AYO14602 144 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SEC14L5O43304 696 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 TRIM3O75382 744 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 RFPL3O75679 317 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 TGM6O95932 706 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 ADH1BP00325 375 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 S100A8P05109 93 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 NUDT7P0C024 238 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SSTR2P30874 369 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SOX3P41225 446 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 GNPDA1P46926 289 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 INPP1P49441 399 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 RPS14P62263 151 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 TIMM50Q3ZCQ8 353 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 TRIQKQ629K1 86 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC25A25Q6KCM7 469 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 FDX2Q6P4F2 183 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 THNSL2Q86YJ6 484 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 C10orf111Q8N326 155 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 C9orf62Q8N4C0 152 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 DNAJC22Q8N4W6 341 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 OR5M1Q8NGP8 315 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 KIAA1143Q96AT1 154 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC25A36Q96CQ1 311 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 HYLS1Q96M11 299 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 LRFN5Q96NI6 719 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 SARGQ9BW04 601 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 OR52A5Q9H2C5 316 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 CLMPQ9H6B4 373 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 C3orf14Q9HBI5 128 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 C1orf109Q9NX04 203 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 CA14Q9ULX7 337 aa7.48□□□□□ -1.21
PDLIM5-221ENST00000542407 LOC102723532A0A0G2JNH3 316 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 A0A1B0GVC2 190 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 A0A1W2PQL4 384 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR89AB7ZAQ6 455 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 WWP2O00308 870 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 SCAMP1O15126 338 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 PLA2G10O15496 165 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 MRPS14O60783 128 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 CATP04040 527 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 ADRB1P08588 477 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 GSTP1P09211 210 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR89BP0CG08 455 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 ACPPP15309 386 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 C5AR1P21730 350 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 FPR3P25089 353 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 MAP2K3P46734 347 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 CDK3Q00526 305 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 CHIT1Q13231 466 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 SPANXN4Q5MJ08 99 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 TIGD3Q6B0B8 471 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC30A6Q6NXT4 461 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 CHMP1BQ7LBR1 199 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 SZRD1Q7Z422 152 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 CACUL1Q86Y37 369 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 TRAPPC5Q8IUR0 188 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 LIX1LQ8IVB5 337 aa7.47□□□□□ -1.21
PDLIM5-221ENST00000542407 CFAP206Q8IYR0 622 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms