RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 DAPL1A0PJW8 107 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 SSNA1O43805 119 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 LINC00271P0C7V0 271 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 CLUP10909 449 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 ENPP1P22413 925 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 VSX2P58304 361 aaPredicted RBP14.3□□□□□ -0.12
CNOT9-208ENST00000542068 E2F1Q01094 437 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 GPR68Q15743 365 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 TMEM240Q5SV17 173 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 CXXC5Q7LFL8 322 aaKnown RBP14.3□□□□□ -0.12
CNOT9-208ENST00000542068 C9orf62Q8N4C0 152 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 KCT2Q8NC54 265 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 DUSP18Q8NEJ0 188 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 LRRC20Q8TCA0 184 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 SETD7Q8WTS6 366 aaKnown RBP14.3□□□□□ -0.12
CNOT9-208ENST00000542068 RFKQ969G6 155 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 CNRIP1Q96F85 164 aaPredicted RBP14.3□□□□□ -0.12
CNOT9-208ENST00000542068 ALG8Q9BVK2 526 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 SPATA5L1Q9BVQ7 753 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 BTBD1Q9H0C5 482 aa14.3□□□□□ -0.12
CNOT9-208ENST00000542068 WSB2Q9NYS7 404 aaPredicted RBP14.3□□□□□ -0.12
CNOT9-208ENST00000542068 EIF3KQ9UBQ5 218 aaKnown RBP14.3□□□□□ -0.12
CNOT9-208ENST00000542068 H0Y8X5 98 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 MT-ND4P03905 459 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 HRGP04196 525 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 IFNGR2P38484 337 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 EPHA5P54756 1037 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 LYPD4Q6UWN0 246 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 OR11H7Q8NGC8 314 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 KIAA1143Q96AT1 154 aaPredicted RBP14.29□□□□□ -0.12
CNOT9-208ENST00000542068 OR7D2Q96RA2 312 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 FAIM2Q9BWQ8 316 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 SPRTNQ9H040 489 aaPredicted RBP14.29□□□□□ -0.12
CNOT9-208ENST00000542068 ATP13A2Q9NQ11 1180 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 ZNF224Q9NZL3 707 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 SLC7A7Q9UM01 511 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 A0A1W2PR48 441 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 C4orf51C9J302 202 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 TEX46H3BTG2 121 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 RNF13O43567 381 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 CHP2O43745 196 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 FGF9P31371 208 aaPredicted RBP14.29□□□□□ -0.12
CNOT9-208ENST00000542068 CSNK1G2P78368 415 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 TSPAN31Q12999 210 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 AGERQ15109 404 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 ZNF542PQ5EBM4 170 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 FBXL6Q8N531 539 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 ARIH2OSQ8N7S6 290 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 SUN3Q8TAQ9 357 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 LCN9Q8WX39 176 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 ASB16Q96NS5 453 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 CAMK1GQ96NX5 476 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 ORAI3Q9BRQ5 295 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 TEX12Q9BXU0 123 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 CCDC86Q9H6F5 360 aaKnown RBP14.29□□□□□ -0.12
CNOT9-208ENST00000542068 MARK1Q9P0L2 795 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 GPR34Q9UPC5 381 aa14.29□□□□□ -0.12
CNOT9-208ENST00000542068 TEX13CA0A0J9YWL9 993 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 SURF4O15260 269 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 DHFRP00374 187 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ASGR2P07307 311 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 SNRPBP14678 240 aaKnown RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 PDX1P52945 283 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 SIM1P81133 766 aaPredicted RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ST3GAL3Q11203 375 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 TNK1Q13470 666 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 RUNX3Q13761 415 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 EOGTQ5NDL2 527 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 PXDC1Q5TGL8 231 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 VASNQ6EMK4 673 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ENPP7Q6UWV6 458 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ZNF761Q86XN6 746 aaPredicted RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 TMIEQ8NEW7 156 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 NUP43Q8NFH3 380 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 OR51A7Q8NH64 312 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 TRMT10AQ8TBZ6 339 aaKnown RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 RELTQ969Z4 430 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 HYLS1Q96M11 299 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 GTPBP2Q9BX10 602 aaKnown RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 C1QTNF6Q9BXI9 259 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ADAP2Q9NPF8 381 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 FBXL4Q9UKA2 621 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 GNB5O14775 395 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 FCER2P06734 321 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 HNRNPA1P09651 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 PGGHGQ32M88 737 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 DEFB134Q4QY38 66 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 SFRP4Q6FHJ7 346 aaPredicted RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 CREB3L2Q70SY1 520 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ACOT4Q8N9L9 421 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 CEP76Q8TAP6 659 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 TSACCQ96A04 125 aaPredicted RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 CBLCQ9ULV8 474 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 ZNF106Q9H2Y7 1883 aaKnown RBP14.28□□□□□ -0.12
CNOT9-208ENST00000542068 CENPVL1A0A0U1RR11 272 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 TSPAN11A1L157 253 aa14.28□□□□□ -0.12
CNOT9-208ENST00000542068 SLC9B1P1A6NJY1 282 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms