RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 OR1G1P47890 313 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 NUMBP49757 651 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SLC26A2P50443 739 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 LBX1P52954 281 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 GNG11P61952 73 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 AP1S1P61966 158 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 VSNL1P62760 191 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CDK16Q00536 496 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 FLI1Q01543 452 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 GLO1Q04760 184 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CKAP4Q07065 602 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 C2orf54Q08AI8 447 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ZNF177Q13360 481 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 GK2Q14410 553 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 POU6F1Q14863 301 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 LTB4RQ15722 352 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CHRNA6Q15825 494 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CAMK4Q16566 473 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 EPC2Q52LR7 807 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 C14orf177Q52M58 125 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TAF1BQ53T94 588 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 HSP90AA4PQ58FG1 418 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TNFAIP8L3Q5GJ75 292 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 RIPPLY2Q5TAB7 128 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ZC2HC1BQ5TFG8 222 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 AGAP7PQ5VUJ5 663 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PRAMEF7Q5VXH5 474 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PYHIN1Q6K0P9 492 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 AFTPHQ6ULP2 937 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TMEM207Q6UWW9 146 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 RTL4Q6ZR62 310 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ASRGL1Q7L266 308 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TAS2R42Q7RTR8 314 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 FAM122BQ7Z309 247 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TAC4Q86UU9 113 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 HOGA1Q86XE5 327 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 HIPK1Q86Z02 1210 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 STHQ8IWL8 128 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ENTHD1Q8IYW4 607 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TDHQ8IZJ6 230 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 RIBC1Q8N443 379 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 UBL4BQ8N7F7 174 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 EIF1ADQ8N9N8 165 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 RNF149Q8NC42 400 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OR5T1Q8NG75 326 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OR4D10Q8NGI6 311 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OR9A1PQ8NGU1 263 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OR4A16Q8NH70 328 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TCP10LQ8TDR4 215 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SAP25Q8TEE9 199 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 METTL21AQ8WXB1 218 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 GTF3AQ92664 365 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 NTAN1Q96AB6 310 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 NXPE2Q96DL1 559 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 FAM122AQ96E09 287 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OMA1Q96E52 524 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ZNF486Q96H40 463 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 TMEM80Q96HE8 168 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PRICKLE1Q96MT3 831 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 TRNT1Q96Q11 434 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 PANX2Q96RD6 677 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CCNL2Q96S94 520 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 CYTH2Q99418 400 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PLIN2Q99541 437 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CDCA3Q99618 268 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 SSX3Q99909 188 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 OPRPNQ99935 248 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 KCNS3Q9BQ31 491 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 C19orf43Q9BQ61 176 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CLEC7AQ9BXN2 247 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 FTHL17Q9BXU8 183 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 MRPL37Q9BZE1 423 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 SLC19A3Q9BZV2 496 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 HOXD1Q9GZZ0 328 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SHARPINQ9H0F6 387 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 C5orf66Q9H5L9 145 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TDRD3Q9H7E2 651 aaKnown RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 IL26Q9NPH9 171 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TIGARQ9NQ88 270 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 AGPAT3Q9NRZ7 376 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SLC35D1Q9NTN3 355 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ZDHHC18Q9NUE0 388 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.81□□□□□ -1.96
USP28-210ENST00000542033 SOHLH2Q9NX45 425 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CMTM6Q9NX76 183 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 BARHL2Q9NY43 387 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 GLS2Q9UI32 602 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ACOT9Q9Y305 439 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 NSG2Q9Y328 171 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 PRELID3BQ9Y3B1 194 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 TMED7Q9Y3B3 224 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 R4GN57 208 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 SALL1Q9NSC2 1324 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 CARMIL3Q8ND23 1372 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 DAPK1P53355 1430 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 FAM135BQ49AJ0 1406 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 ZNF518AQ6AHZ1 1483 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 EHBP1L1Q8N3D4 1523 aa2.81□□□□□ -1.96
USP28-210ENST00000542033 GREB1LQ9C091 1923 aaPredicted RBP2.81□□□□□ -1.96
USP28-210ENST00000542033 INO80Q9ULG1 1556 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms