RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PEX5LQ8IYB4 626 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 MFSD9Q8NBP5 474 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 OTULINQ96BN8 352 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 SECISBP2Q96T21 854 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 ZNF649Q9BS31 505 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 RNF32Q9H0A6 362 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 OR6C2Q9NZP2 312 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 CD207Q9UJ71 328 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 CHST2Q9Y4C5 530 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 HEBP2Q9Y5Z4 205 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 CSNK1G3Q9Y6M4 447 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 MDC1Q14676 2089 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 A0A0G2JMP0 313 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 P2RX6O15547 441 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 AKR7A2O43488 359 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 AKAP8O43823 692 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 CTSVO60911 334 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 ZNF780AO75290 641 aaPredicted RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 CHRNB1P11230 501 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 CSNK2A2P19784 350 aaPredicted RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 GZMKP49863 264 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 SRP54P61011 504 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 TRA2BP62995 288 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 DBPQ10586 325 aaPredicted RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 DSG2Q14126 1118 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 GPR18Q14330 331 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 AADACL4Q5VUY2 407 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 ZNF57Q68EA5 555 aaPredicted RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 VASNQ6EMK4 673 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 MRM1Q6IN84 353 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 SLC48A1Q6P1K1 146 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 Q6ZSR6 202 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 KLBQ86Z14 1044 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 KLHL36Q8N4N3 616 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 DTX3Q8N9I9 347 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 DIO2Q92813 273 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 RFKQ969G6 155 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 TRIM63Q969Q1 353 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 OR7D2Q96RA2 312 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 WACQ9BTA9 647 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 SLC38A1Q9H2H9 487 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 TRIM45Q9H8W5 580 aaPredicted RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 POLMQ9NP87 494 aaPredicted RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 SLC13A4Q9UKG4 626 aa11.66□□□□□ -0.54
RNF4-222ENST00000541204 TMA7Q9Y2S6 64 aaKnown RBP11.66□□□□□ -0.54
RNF4-222ENST00000541204 LOC105369274A0A096LPK9 316 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 FAM183AA6NL82 134 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 F3P13726 295 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 HNRNPA2B1P22626 353 aaKnown RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 CLDN20P56880 219 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 STXBP1P61764 594 aaKnown RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 CSTF1Q05048 431 aaKnown RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 GNA13Q14344 377 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 ALG11Q2TAA5 492 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 FBXO42Q6P3S6 717 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 METAP1DQ6UB28 335 aaPredicted RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 OR4N4Q8N0Y3 316 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 PIGXQ8TBF5 258 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 FAM131CQ96AQ9 280 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 SCARF2Q96GP6 870 aaPredicted RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 ART5Q96L15 291 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 KCNJ15Q99712 375 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 GON7Q9BXV9 100 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 ZNF780BQ9Y6R6 833 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 TNFRSF10AO00220 468 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 PIP5K1CO60331 668 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 MPIP34949 423 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 ANXA11P50995 505 aaKnown RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 ST3GAL3Q11203 375 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 EOGTQ5NDL2 527 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 TIGD3Q6B0B8 471 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 BHLHB9Q6PI77 547 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 TMEM64Q6YI46 380 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 TMEM91Q6ZNR0 172 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 ASPGQ86U10 573 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 NRMQ8IXM6 262 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 NUP43Q8NFH3 380 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 DNAJA4Q8WW22 397 aaPredicted RBP11.65□□□□□ -0.54
RNF4-222ENST00000541204 DEDD2Q8WXF8 326 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 GALNT9Q9HCQ5 603 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 CES1P1Q9UKY3 287 aa11.65□□□□□ -0.54
RNF4-222ENST00000541204 A0A0X1KG70 313 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 SOCS6O14544 535 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 HRO43593 1189 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 PLOD3O60568 738 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 FCMRO60667 390 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 KCNJ13O60928 360 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 C1QBP02746 253 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 ARSBP15848 533 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 UGT2B7P16662 529 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 GABRG2P18507 467 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 ELK1P19419 428 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 TGM3Q08188 693 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 FZD5Q13467 585 aa11.64□□□□□ -0.55
RNF4-222ENST00000541204 SF3A2Q15428 464 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms