RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 OR52D1Q9H346 318 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 KCMF1Q9P0J7 381 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 NLKQ9UBE8 527 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 CACNB4O00305 520 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 FGF17O60258 216 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 ACSL1P33121 698 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 RPS7P62081 194 aaKnown RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF628Q5EBL2 1059 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 SLC25A30Q5SVS4 291 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 CXXC5Q7LFL8 322 aaKnown RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 Q8N402 240 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 SDF2Q99470 211 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 IL20Q9NYY1 176 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 GRIP1Q9Y3R0 1128 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 DMDP11532 3685 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 ADH1BP00325 375 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 CELA2BP08218 269 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 IFI30P13284 250 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 NNATQ16517 81 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 GXYLT1Q4G148 440 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 MBOAT2Q6ZWT7 520 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 ARL14Q8N4G2 192 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 OR10H4Q8NGA5 316 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 PTCHD1Q96NR3 888 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 OR2M4Q96R27 311 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 TIMP4Q99727 224 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 PITHD1Q9GZP4 211 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-210ENST00000539599 MAT2BQ9NZL9 334 aa13.08□□□□□ -0.32
UBE3B-210ENST00000539599 OR6C74A6NCV1 312 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 CCDC182A6NF36 153 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 LRRN3E7EW58 273 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 IMPA2O14732 288 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 KLF4O43474 513 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 LANCL1O43813 399 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 CDC123O75794 336 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-210ENST00000539599 SLC2A2P11168 524 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-210ENST00000539599 MYL9P24844 172 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 FPR3P25089 353 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 SHC2P98077 582 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 E2F1Q01094 437 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 IDNKQ5T6J7 187 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 MRGPREQ86SM8 312 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 SFXN1Q9H9B4 322 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 KLHL28Q9NXS3 571 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 TNFRSF10DQ9UBN6 386 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF232Q9UNY5 417 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 EXOSC1Q9Y3B2 195 aaKnown RBP13.07□□□□□ -0.32
UBE3B-210ENST00000539599 FANCMQ8IYD8 2048 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 A0A0B4J203 849 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 STK25O00506 426 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 PLRG1O43660 514 aaKnown RBP13.07□□□□□ -0.32
UBE3B-210ENST00000539599 PAHP00439 452 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 IL9P15248 144 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 NDUFV2P19404 249 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 NT5EP21589 574 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 SHC1P29353 583 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 KRR1Q13601 381 aaKnown RBP13.07□□□□□ -0.32
UBE3B-210ENST00000539599 FCRL6Q6DN72 434 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 XKRXQ6PP77 449 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 ARL9Q6T311 187 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF322Q6U7Q0 402 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-210ENST00000539599 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 FLVCR1-AS1Q8TAF5 88 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 FANK1Q8TC84 345 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 MS4A4EQ96PG1 132 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 OR2A5Q96R48 311 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 WACQ9BTA9 647 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 SLC22A4Q9H015 551 aa13.07□□□□□ -0.32
UBE3B-210ENST00000539599 A0A0G2JMP0 313 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 A0A0X1KG70 313 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 SYT5O00445 386 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 GUCY1B2O75343 617 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 CPMP14384 443 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 UGT2B7P16662 529 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 PRKAR1BP31321 381 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 ACVR1BP36896 505 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 ANXA11P50995 505 aaKnown RBP13.06□□□□□ -0.32
UBE3B-210ENST00000539599 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 GPR18Q14330 331 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 GNA13Q14344 377 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 DUSP6Q16828 381 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 HEPHL1Q6MZM0 1159 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 MTFR2Q6P444 385 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 KLHL36Q8N4N3 616 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 C17orf47Q8NEP4 570 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 OR4M2Q8NGB6 313 aa13.06□□□□□ -0.32
UBE3B-210ENST00000539599 OR4K14Q8NGD5 310 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms