RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PAIP1Q9H074 479 aaKnown RBP12.41□□□□□ -0.42
CD9-208ENST00000538834 CALHM2Q9HA72 323 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 MED4Q9NPJ6 270 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 ICAM5Q9UMF0 924 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 RNF6Q9Y252 685 aa12.41□□□□□ -0.42
CD9-208ENST00000538834 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 C15orf38-AP3S2A0A0A6YYH1 394 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 A0A0G2JNJ9 132 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 CENPVL1A0A0U1RR11 272 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 MBD3L4A6NDZ8 208 aaPredicted RBP12.4□□□□□ -0.42
CD9-208ENST00000538834 MBD3L3A6NE82 208 aaPredicted RBP12.4□□□□□ -0.42
CD9-208ENST00000538834 MBD3L5A6NJ08 208 aaPredicted RBP12.4□□□□□ -0.42
CD9-208ENST00000538834 LINC01387J3KSC0 135 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 OIP5O43482 229 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 NDUFB5O43674 189 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 KIAA0513O60268 411 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 STX11O75558 287 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 UGT2B17O75795 530 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 CLDN14O95500 239 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 NTN1O95631 604 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 OR12D1P0DN82 309 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 BMP2P12643 396 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 NID1P14543 1247 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 IGFBP2P18065 325 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 SOAT1P35610 550 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 DCTP40126 519 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 PMPCAQ10713 525 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 TYW3Q6IPR3 259 aaKnown RBP12.4□□□□□ -0.42
CD9-208ENST00000538834 ZNF585AQ6P3V2 769 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 FRRS1Q6ZNA5 592 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 IFNEQ86WN2 208 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 MBD3L2Q8NHZ7 208 aaPredicted RBP12.4□□□□□ -0.42
CD9-208ENST00000538834 JADE3Q92613 823 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 RND1Q92730 232 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 ARSGQ96EG1 525 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 ZBTB18Q99592 522 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 NPAS1Q99742 590 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 Q9UFV3 132 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 DTNAQ9Y4J8 743 aa12.4□□□□□ -0.42
CD9-208ENST00000538834 MAST4O15021 2626 aa12.4□□□□□ -0.43
CD9-208ENST00000538834 A0A087WZY1 265 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 A1L4Q6 167 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 OR2M5A3KFT3 312 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 RFXANKO14593 260 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ZNF17P17021 662 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 RPS4Y1P22090 263 aaKnown RBP12.39□□□□□ -0.43
CD9-208ENST00000538834 COL8A1P27658 744 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
CD9-208ENST00000538834 CHRNB4P30926 498 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 RFX3P48380 749 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ZNF117Q03924 483 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 MAPK14Q16539 360 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 PLPPR5Q32ZL2 321 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 SLC25A53Q5H9E4 307 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 COX20Q5RI15 118 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 METTL21CQ5VZV1 264 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 CBLN3Q6UW01 205 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ARSKQ6UWY0 536 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 RNF130Q86XS8 419 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 LACC1Q8IV20 430 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 LIX1LQ8IVB5 337 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 MSRB3Q8IXL7 192 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 GTPBP8Q8N3Z3 284 aaPredicted RBP12.39□□□□□ -0.43
CD9-208ENST00000538834 ARFGAP2Q8N6H7 521 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 NAXEQ8NCW5 288 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 OR4K17Q8NGC6 315 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 OR14L1PQ8NHC6 308 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 POC1BQ8TC44 478 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ASB5Q8WWX0 329 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 PMM1Q92871 262 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 RAB8BQ92930 207 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 VPS33AQ96AX1 596 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ROPN1LQ96C74 230 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ZG16BQ96DA0 208 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
CD9-208ENST00000538834 ENKD1Q9H0I2 346 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 SLC38A1Q9H2H9 487 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 EXO5Q9H790 373 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 PTGES2Q9H7Z7 377 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 EXD2Q9NVH0 621 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 SLC25A37Q9NYZ2 338 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 CLCF1Q9UBD9 225 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 ZNF337Q9Y3M9 751 aa12.39□□□□□ -0.43
CD9-208ENST00000538834 DSPPQ9NZW4 1301 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 ANKHD1Q8IWZ3 2542 aaKnown RBP12.38□□□□□ -0.43
CD9-208ENST00000538834 NPIPA5A0A0B4J1W7 369 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 NPIPA7E9PJI5 369 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 SCDO00767 359 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 EFNA2O43921 213 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 EIF4E2O60573 245 aaKnown RBP12.38□□□□□ -0.43
CD9-208ENST00000538834 GSNP06396 782 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 NPIPA8P0DM63 369 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 PEPDP12955 493 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 HK1P19367 917 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 CAPN3P20807 821 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 STARP49675 285 aa12.38□□□□□ -0.43
CD9-208ENST00000538834 P2RX1P51575 399 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms