RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ARMCX1Q9P291 453 aa16.32■□□□□ 0.2
CCDC61-201ENST00000536603 TRIM33Q9UPN9 1127 aa16.32■□□□□ 0.2
CCDC61-201ENST00000536603 SCDO00767 359 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 NDUFB5O43674 189 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 NGFRP08138 427 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 TCEA1P23193 301 aaKnown RBP16.31■□□□□ 0.2
CCDC61-201ENST00000536603 DPP4P27487 766 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 SRD5A2P31213 254 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 DNAJC14Q6Y2X3 702 aaPredicted RBP16.31■□□□□ 0.2
CCDC61-201ENST00000536603 MSANTD1Q6ZTZ1 278 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 RNF130Q86XS8 419 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 FADS6Q8N9I5 356 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 GATSQ8NAP1 163 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 OR2M3Q8NG83 312 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 RAB8BQ92930 207 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 ITCHQ96J02 903 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 DMRTA2Q96SC8 542 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 OR2B2Q9GZK3 357 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 SLC6A13Q9NSD5 602 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 EXD2Q9NVH0 621 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 TAS2R10Q9NYW0 307 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 DKKL1Q9UK85 242 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 AKAP9Q99996 3911 aa16.31■□□□□ 0.2
CCDC61-201ENST00000536603 HIVEP1P15822 2718 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 NPIPA5A0A0B4J1W7 369 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 NPIPA7E9PJI5 369 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 GMFGO60234 142 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 ANP32DO95626 131 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 NPIPA8P0DM63 369 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 BMP7P18075 431 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 DSCR4P56555 118 aaPredicted RBP16.3■□□□□ 0.2
CCDC61-201ENST00000536603 FLYWCH1Q4VC44 716 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 AGKQ53H12 422 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 C6orf10Q5SRN2 563 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 VASNQ6EMK4 673 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 BLOC1S3Q6QNY0 202 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 C16orf62Q7Z3J2 963 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 CHDHQ8NE62 594 aaPredicted RBP16.3■□□□□ 0.2
CCDC61-201ENST00000536603 ABTB1Q969K4 478 aaPredicted RBP16.3■□□□□ 0.2
CCDC61-201ENST00000536603 DTNBP1Q96EV8 351 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 TIMP4Q99727 224 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 HOXD1Q9GZZ0 328 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 PTGES2Q9H7Z7 377 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 SLC52A3Q9NQ40 469 aa16.3■□□□□ 0.2
CCDC61-201ENST00000536603 RPH3AQ9Y2J0 694 aaPredicted RBP16.3■□□□□ 0.2
CCDC61-201ENST00000536603 MRPS18CQ9Y3D5 142 aaKnown RBP16.3■□□□□ 0.2
CCDC61-201ENST00000536603 FIGNL2A6NMB9 653 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 NR5A2O00482 541 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 ZIC3O60481 467 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 AGR2O95994 175 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 AK1P00568 194 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 ACVR2AP27037 513 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 KHKP50053 298 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 ATP12AP54707 1039 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 IRX1P78414 480 aaPredicted RBP16.29■□□□□ 0.2
CCDC61-201ENST00000536603 CRYZQ08257 329 aaKnown RBP16.29■□□□□ 0.2
CCDC61-201ENST00000536603 KLF10Q13118 480 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 RCAN2Q14206 197 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 ARHGAP11BQ3KRB8 267 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 NHSL2Q5HYW2 709 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 ATAD3BQ5T9A4 648 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 TMEM211Q6ICI0 200 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 HEPHL1Q6MZM0 1159 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 SLC2A7Q6PXP3 512 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 OLIG3Q7RTU3 272 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 IFNEQ86WN2 208 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 TREML1Q86YW5 311 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 RPRMLQ8N4K4 120 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 PNPT1Q8TCS8 783 aaKnown RBP16.29■□□□□ 0.2
CCDC61-201ENST00000536603 ASB5Q8WWX0 329 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 GTF2H4Q92759 462 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 CCDC106Q9BWC9 280 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 UGT2B28Q9BY64 529 aa16.29■□□□□ 0.2
CCDC61-201ENST00000536603 PCNX3Q9H6A9 2034 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 IGLV3-32A0A0A0MS00 114 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 A0A1W2PQD3 144 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 FAM90A27PA6NNH2 459 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 HMGN4O00479 90 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 FCMRO60667 390 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 WDR1O75083 606 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 STX11O75558 287 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 KRT75O95678 551 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 ACTL6AO96019 429 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 ZCCHC18P0CG32 403 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 HK1P19367 917 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 GCKP35557 465 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 RNF144AP50876 292 aaPredicted RBP16.28■□□□□ 0.2
CCDC61-201ENST00000536603 GPR68Q15743 365 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 CD226Q15762 336 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 GTDC1Q4AE62 458 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 DCST1Q5T197 706 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 TMEM200AQ86VY9 491 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 MARVELD2Q8N4S9 558 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 ZNF527Q8NB42 609 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 ZFP90Q8TF47 636 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 SPDL1Q96EA4 605 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 SFXN2Q96NB2 322 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 TMEM45AQ9NWC5 275 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 MKLN1Q9UL63 735 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms