RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OR5D16Q8NGK9 328 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 ACTRT2Q8TDY3 377 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 ACBD3Q9H3P7 528 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 JKAMPQ9P055 326 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 AP4B1Q9Y6B7 739 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 POLQO75417 2590 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 RNF103-CHMP3A0A140T963 221 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 ENO4A6NNW6 628 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 EEF1E1-BLOC1S5C9J1V9 151 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 H0YC42 278 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 SEC14L5O43304 696 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 EEF1E1O43324 174 aaKnown RBP27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 TGM6O95932 706 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 KITP10721 976 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 CAPN3P20807 821 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 MATN1P21941 496 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 TPD52P55327 224 aaPredicted RBP27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 RPS26P62854 115 aaKnown RBP27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 OCRLQ01968 901 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 SNTB1Q13884 538 aaKnown RBP27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 SPANXN4Q5MJ08 99 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 AGBL2Q5U5Z8 902 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 SPATA19Q7Z5L4 167 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 ANKRD46Q86W74 232 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 SH3YL1Q96HL8 342 aaPredicted RBP27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 SERHL2Q9H4I8 314 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 WDR55Q9H6Y2 383 aaPredicted RBP27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 AIG1Q9NVV5 245 aa27.32■■□□□ 1.96
SSSCA1-207ENST00000533115 DUXAA6NLW8 204 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 SLCO1B7G3V0H7 640 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 CPSF4O95639 269 aaKnown RBP27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 ZNF17P17021 662 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 EPHA3P29320 983 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 CLDN20P56880 219 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 FLYWCH1Q4VC44 716 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 KLHL26Q53HC5 615 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 P4HA3Q7Z4N8 544 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 MTERF4Q7Z6M4 381 aaKnown RBP27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 GCNT2Q8N0V5 402 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 B4GALNT2Q8NHY0 566 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 SLC35G5Q96KT7 338 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 MED12LQ86YW9 2145 aa27.31■■□□□ 1.96
SSSCA1-207ENST00000533115 NPIPA5A0A0B4J1W7 369 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 GOLGA8QA0A0J9YX86 632 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 GOLGA8OA6NCC3 632 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 SLC22A20A6NK97 555 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 E9PBE3 544 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 NPIPA7E9PJI5 369 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 GOLGA8NF8WBI6 632 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 TNFRSF21O75509 655 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 NPIPA8P0DM63 369 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 S100A3P33764 101 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 KIR2DL3P43628 341 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 ZNF41P51814 821 aaPredicted RBP27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 NME5P56597 212 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 FAM174BQ3ZCQ3 159 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 PHOSPHO1Q8TCT1 267 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 SMPDL3BQ92485 455 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 ARL8AQ96BM9 186 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 ZBTB8AQ96BR9 441 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 TEX37Q96LM6 180 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 SDF2Q99470 211 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 MED17Q9NVC6 651 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 STOML1Q9UBI4 398 aa27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 ANKHD1Q8IWZ3 2542 aaKnown RBP27.3■■□□□ 1.96
SSSCA1-207ENST00000533115 UQCRC2P22695 453 aa27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 ATP12AP54707 1039 aa27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 UFM1P61960 85 aa27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 EEF1A1P68104 462 aaKnown RBP27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 PLPPR5Q32ZL2 321 aa27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 EEF1A1P5Q5VTE0 462 aa27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 GTPBP8Q8N3Z3 284 aaPredicted RBP27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 CHDHQ8NE62 594 aaPredicted RBP27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 PINK1Q9BXM7 581 aa27.29■■□□□ 1.96
SSSCA1-207ENST00000533115 C7orf72A4D263 438 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 NPIPB9F8W1W9 429 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 H3BNH8 94 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 KLF11O14901 512 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 AK1P00568 194 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 RPS3AP61247 264 aaKnown RBP27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 ZNF117Q03924 483 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 OR2A2Q6IF42 318 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 METTL25Q8N6Q8 603 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 MIPOL1Q8TD10 442 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 FIG4Q92562 907 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 NPAS1Q99742 590 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 KLHDC3Q9BQ90 382 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 PIGMQ9H3S5 423 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 CRIM1Q9NZV1 1036 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 GPR45Q9Y5Y3 372 aa27.28■■□□□ 1.96
SSSCA1-207ENST00000533115 CRHP06850 196 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 RNF144AP50876 292 aaPredicted RBP27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 GGNQ86UU5 652 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 KIF18BQ86Y91 864 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 ZZZ3Q8IYH5 903 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 ZNF75CPQ92670 426 aaPredicted RBP27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 OR51I1Q9H343 314 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 BTNL2Q9UIR0 455 aa27.27■■□□□ 1.96
SSSCA1-207ENST00000533115 ZNF175Q9Y473 711 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms