RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SPATA21Q7Z572 469 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 GTF2IRD2Q86UP8 949 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 TMEM151AQ8N4L1 468 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 ELOA3Q8NG57 546 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 OR10H5Q8NGA6 315 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 EFHD2Q96C19 240 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-223ENST00000533079 ADAD1Q96M93 576 aaKnown RBP11.09□□□□□ -0.63
CAPN1-223ENST00000533079 ELAC2Q9BQ52 826 aaKnown RBP11.09□□□□□ -0.63
CAPN1-223ENST00000533079 TRIM2Q9C040 744 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 FOLH1BQ9HBA9 442 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 FAM120CQ9NX05 1096 aaKnown RBP11.09□□□□□ -0.63
CAPN1-223ENST00000533079 TMEM216Q9P0N5 145 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 XPR1Q9UBH6 696 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 ARL2BPQ9Y2Y0 163 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 OR10H1Q9Y4A9 318 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 SVEP1Q4LDE5 3571 aa11.09□□□□□ -0.63
CAPN1-223ENST00000533079 IGLV3-32A0A0A0MS00 114 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 UBFD1O14562 309 aaKnown RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SSX4O60224 188 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 GPRIN2O60269 458 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 FADS1O60427 444 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 COQ9O75208 318 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SNNO75324 88 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SNUPNO95149 360 aaKnown RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SYNGR4O95473 234 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 CPA3P15088 417 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 HNF1AP20823 631 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 IL32P24001 234 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 ARL1P40616 181 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SLC6A8P48029 635 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 DUSP2Q05923 314 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 CTU2Q2VPK5 515 aaKnown RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 CYP27C1Q4G0S4 372 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 AGAP6Q5VW22 663 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 FIGNL1Q6PIW4 674 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 CMC1Q7Z7K0 106 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 GABRG1Q8N1C3 465 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 KBTBD8Q8NFY9 601 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 OR10D3Q8NH80 312 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 GPR78Q96P69 363 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 SIKE1Q9BRV8 207 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 C12orf65Q9H3J6 166 aaKnown RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 BRF2Q9HAW0 419 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 THAP1Q9NVV9 213 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 MED11Q9P086 117 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 KLHL14Q9P2G3 628 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 GDF2Q9UK05 429 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 MRTO4Q9UKD2 239 aaKnown RBP11.08□□□□□ -0.64
CAPN1-223ENST00000533079 UTS2RQ9UKP6 389 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 USF3Q68DE3 2245 aa11.08□□□□□ -0.64
CAPN1-223ENST00000533079 A0A087WZY1 265 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 FAM234BA2RU67 622 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 C7orf72A4D263 438 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 C17orf51A8MQB3 221 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 WIPF1O43516 503 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PLOD3O60568 738 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 NDUFS7O75251 213 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 GCM2O75603 506 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 SLITRK5O94991 958 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 SERPINE1P05121 402 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PGRP06401 933 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 RBP1P09455 135 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 CSF3P09919 207 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PABPC4LP0CB38 370 aaKnown RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 BGNP21810 368 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ALDH9A1P49189 494 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 CCNG1P51959 295 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PSMD4P55036 377 aaKnown RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 BSPH1Q075Z2 132 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 GALNT1Q10472 559 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 STX5Q13190 355 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 STX3Q13277 289 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ACAP2Q15057 778 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 TAB1Q15750 504 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 SFRP5Q5T4F7 317 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 CYB5R2Q6BCY4 276 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 CGB2Q6NT52 195 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ESPNLQ6ZVH7 1005 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 CENPLQ8N0S6 344 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PLD6Q8N2A8 252 aaKnown RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 OR5M1Q8NGP8 315 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PIWIL2Q8TC59 973 aaKnown RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ATP6V1E2Q96A05 226 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 TM4SF18Q96CE8 201 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ADGRG7Q96K78 797 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 MRPL57Q9BQC6 102 aaKnown RBP11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ELOVL6Q9H5J4 265 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 RABEP2Q9H5N1 569 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 GP6Q9HCN6 339 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 PFDN4Q9NQP4 134 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 GIMAP4Q9NUV9 329 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 NMRK1Q9NWW6 199 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 ABCA1O95477 2261 aa11.07□□□□□ -0.64
CAPN1-223ENST00000533079 WDR91A4D1P6 747 aa11.06□□□□□ -0.64
CAPN1-223ENST00000533079 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms