RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PCNAP12004 261 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 EZRP15311 586 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 NELFEP18615 380 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 CD22P20273 847 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 MAGP20916 626 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 GNLYP22749 145 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CHMP24386 653 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SERPINB1P30740 379 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CSTF2P33240 577 aaKnown RBP eCLIP4.16□□□□□ -1.74
USP48-211ENST00000526044 AHRP35869 848 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 NOVA1P51513 510 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 FOXA1P55317 472 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 RPS15AP62244 130 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 PHEXP78562 749 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ACY1Q03154 408 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ZNF33BQ06732 778 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ZFP36L1Q07352 338 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 TRAF3Q13114 568 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 UGT3A2Q3SY77 523 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 GGTA1PQ4G0N0 100 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 RAB12Q6IQ22 244 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SCIMPQ6UWF3 145 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 Q6ZSV7 163 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 PRSS42Q7Z5A4 293 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ARHGAP22Q7Z5H3 698 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CPLX4Q7Z7G2 160 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 ASPGQ86U10 573 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 PLD3Q8IV08 490 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 LRRC34Q8IZ02 419 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 IQCF1Q8N6M8 205 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ZNF781Q8N8C0 355 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 PRR26Q8N8Z3 221 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 TEX45Q8NA69 505 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 MFSD9Q8NBP5 474 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CAMKVQ8NCB2 501 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ZNF740Q8NDX6 193 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 DNAAF1Q8NEP3 725 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 TRPV3Q8NET8 790 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 TTLQ8NG68 377 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 OR7G3Q8NG95 312 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 OR4N2Q8NGD1 307 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 MOSPD2Q8NHP6 518 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 HUS1BQ8NHY5 278 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 AGR3Q8TD06 166 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SLC13A3Q8WWT9 602 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SELENOMQ8WWX9 145 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 RERGQ96A58 199 aaPredicted RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 MIB2Q96AX9 1013 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 FAM122AQ96E09 287 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CMTM7Q96FZ5 175 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 OR2A5Q96R48 311 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 KCNA7Q96RP8 456 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SORT1Q99523 831 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CCT7Q99832 543 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 NLNQ9BYT8 704 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 STRADBQ9C0K7 418 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CHRNA10Q9GZZ6 450 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 RHBGQ9H310 441 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 FAM60AQ9NP50 221 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SLCO1B3Q9NPD5 702 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 NMRK1Q9NWW6 199 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SOHLH2Q9NX45 425 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 PSD3Q9NYI0 1048 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 AHSPQ9NZD4 102 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 IL36RNQ9UBH0 155 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SH3BGRL2Q9UJC5 107 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 HAO1Q9UJM8 370 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 ZNF225Q9UK10 706 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 PILRAQ9UKJ1 303 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 PLCL2Q9UPR0 1127 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 FIS1Q9Y3D6 152 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 AP1M2Q9Y6Q5 423 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 MDC1Q14676 2089 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 PCNX2A6NKB5 2137 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SNRNP200O75643 2136 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 TTC28Q96AY4 2481 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 MN1Q10571 1320 aaPredicted RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 ASXL3Q9C0F0 2248 aa4.15□□□□□ -1.74
USP48-211ENST00000526044 HYKKA2RU49 373 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 LRIT2A6NDA9 550 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 URADA6NGE7 173 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TRPC5OSA6NMA1 111 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 MAGEB17A8MXT2 336 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 D6RAR5 112 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FOXE1O00358 373 aaPredicted RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 HAT1O14929 419 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 HDAC3O15379 428 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CTSVO60911 334 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 KCNK5O95279 499 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ADAP00813 363 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 NGFRP08138 427 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ANKRD34CP0C6C1 535 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 LINC00032P0C843 101 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TROVE2P10155 538 aaKnown RBP eCLIP4.15□□□□□ -1.75
USP48-211ENST00000526044 THRAP10827 490 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FOLR1P15328 257 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ABCD3P28288 659 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CCKBRP32239 447 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 VSX2P58304 361 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms