RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 MAKP20794 623 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 PAICSP22234 425 aaKnown RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ALAS2P22557 587 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 HTR2AP28223 471 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SEC13P55735 322 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 CD83Q01151 205 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 RUNX2Q13950 521 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 TCEA2Q15560 299 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 TATDN3Q17R31 274 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 TRMT12Q53H54 448 aaKnown RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SMARCD3Q6STE5 483 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 WDR88Q6ZMY6 472 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 MEPCEQ7L2J0 689 aaKnown RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 YAF2Q8IY57 180 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ZCCHC10Q8TBK6 192 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 FANK1Q8TC84 345 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 NACC2Q96BF6 587 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 TM4SF19Q96DZ7 209 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SMIM10Q96HG1 83 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ART5Q96L15 291 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 OR2M4Q96R27 311 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SERINC2Q96SA4 455 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ALG8Q9BVK2 526 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 C1QTNF7Q9BXJ2 289 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF350Q9GZX5 532 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ENKD1Q9H0I2 346 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 FN3KQ9H479 309 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 WDR70Q9NW82 654 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SIDT1Q9NXL6 827 aaKnown RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 BABAM2Q9NXR7 383 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ADAM30Q9UKF2 790 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SIRT4Q9Y6E7 314 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ATG2AQ2TAZ0 1938 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 FAM240BA0A1B0GVZ2 78 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 BHLHE40O14503 412 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SLC31A1O15431 190 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 P2RX6O15547 441 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 GKN3PP0CG01 181 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 CPMP14384 443 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 RPS4Y1P22090 263 aaKnown RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 AK4P27144 223 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 MTNR1BP49286 362 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 CTBP2P56545 445 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 GPM6BQ13491 265 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SUZ12Q15022 739 aaKnown RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SF3A2Q15428 464 aaKnown RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 OR1Q1Q15612 314 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 DEFB134Q4QY38 66 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 PAMR1Q6UXH9 720 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 USP53Q70EK8 1073 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TRILQ7L0X0 811 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF438Q7Z4V0 828 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 NR2C2APQ86WQ0 139 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 RNF113BQ8IZP6 322 aaKnown RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TMEM99Q8N816 258 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 OR52L1Q8NGH7 329 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 PFN4Q8NHR9 129 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TMEM239Q8WW34 195 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ACOT12Q8WYK0 555 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 HS6ST2Q96MM7 605 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 OR2A5Q96R48 311 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 CD180Q99467 661 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 YIPF2Q9BWQ6 316 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SLC6A17Q9H1V8 727 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 KCNN2Q9H2S1 579 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 PIGUQ9H490 435 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 C20orf141Q9NUB4 165 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF624Q9P2J8 865 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 NLKQ9UBE8 527 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 DAPP1Q9UN19 280 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 C19orf53Q9UNZ5 99 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ALG5Q9Y673 324 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 CLCA3PQ9Y6N3 262 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3DA0A087WVF3 549 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3IA0A087WXS9 549 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3EA0A087X179 549 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 CENPBD1B2RD01 187 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 FAM25AB3EWG3 89 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 FAM25CB3EWG5 89 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 FAM25GB3EWG6 89 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3LB9A6J9 549 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SGK494L7N484 410 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 B3GALT2O43825 422 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 LYPD3O95274 346 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 DBIP07108 87 aaKnown RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3HP0C7X1 549 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 IFI30P13284 250 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ELK1P19419 428 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBXA2RP21731 343 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 NDUFS1P28331 727 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TLX1P31314 330 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ADPRHP54922 357 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 CLDN20P56880 219 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3CQ6IPX1 549 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3Q8IZP1 549 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TCTE3Q8IZS6 198 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF619Q8N2I2 560 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms