RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 P2RY8Q86VZ1 359 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 POGLUT1Q8NBL1 392 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 OR8D4Q8NGM9 314 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 C9orf43Q8TAL5 461 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 SENP5Q96HI0 755 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 ZNF559Q9BR84 538 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 CDCA4Q9BXL8 241 aa17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 PNO1Q9NRX1 252 aaKnown RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC9-210ENST00000521667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.08■□□□□ 0.332e-6■■■■□ 20.5
TRAPPC9-210ENST00000521667 FRYLO94915 3013 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 IGKV3D-11A0A0A0MRZ8 115 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 A0A1B0GX78 115 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 CPED1A4D0V7 1026 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 LYPD3O95274 346 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF182P17025 639 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 PSMD4P55036 377 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 AQP6Q13520 282 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 PLAG1Q6DJT9 500 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 MRGPREQ86SM8 312 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 RNF113BQ8IZP6 322 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 BCORP1Q8N888 145 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 TSLPQ969D9 159 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 DPYSL5Q9BPU6 564 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMEM27Q9HBJ8 222 aa17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 RPL36Q9Y3U8 105 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-210ENST00000521667 LY6G6EA0A0G2JKS1 128 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 SIGLEC6O43699 453 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 DYRK3O43781 588 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 ADORA3P0DMS8 318 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 ATP12AP54707 1039 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 EFNB1P98172 346 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 OCA2Q04671 838 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 SQSTM1Q13501 440 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 SNAPC1Q16533 368 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZSWIM7Q19AV6 140 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 MEDAGQ5VYS4 303 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF613Q6PF04 617 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 WDR88Q6ZMY6 472 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 ARHGAP22Q7Z5H3 698 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMEM151BQ8IW70 566 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 OSTF1Q92882 214 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 CRELD1Q96HD1 420 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 DNAJB12Q9NXW2 375 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 ATXN7L1Q9ULK2 861 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 U3KQA8 63 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 SPTBP11277 2137 aa17.07■□□□□ 0.32
TRAPPC9-210ENST00000521667 BCL10O95999 233 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 SPCS2Q15005 226 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 PERM1Q5SV97 790 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 ARHGAP40Q5TG30 622 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF574Q6ZN55 896 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMPRSS9Q7Z410 1059 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 BCDIN3DQ7Z5W3 292 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 C7orf57Q8NEG2 295 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 RNF217Q8TC41 542 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMEM239Q8WW34 195 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 FGF11Q92914 225 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 PRRG3Q9BZD7 231 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 IL20Q9NYY1 176 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF223Q9UK11 482 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 NCOR1O75376 2440 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TNRC6BQ9UPQ9 1833 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 CNOT3O75175 753 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 PTHP01270 115 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 CFIP05156 583 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 DBTP11182 482 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 CD36P16671 472 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TGFBR2P37173 567 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC37A1P57057 533 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 RHAGQ02094 409 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF91Q05481 1191 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TIGD6Q17RP2 521 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 SYT14P1Q58G82 188 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 C1orf189Q5VU69 101 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF620Q6ZNG0 422 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 CLDN22Q8N7P3 220 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC35B4Q969S0 331 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 LRR1Q96L50 414 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC38A2Q96QD8 506 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TSSK6Q9BXA6 273 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 TBC1D23Q9NUY8 699 aa17.06■□□□□ 0.32
TRAPPC9-210ENST00000521667 A8MUA0 341 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 M0R082 166 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 CDC42EP2O14613 210 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 YKT6O15498 198 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 ADRA2AP08913 450 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 PTNP21246 168 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 VWA2Q5GFL6 755 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 CLEC12AQ5QGZ9 265 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 PEAR1Q5VY43 1037 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 CMIPQ8IY22 773 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF321PQ8N8H1 164 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 FAM181AQ8N9Y4 354 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMEM163Q8TC26 289 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 CLIP3Q96DZ5 547 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC46A1Q96NT5 459 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms