RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 DHPSP49366 369 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 PUDPQ08623 228 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 RAB40BQ12829 278 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 PEX6Q13608 980 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 DDX39BQ13838 428 aaKnown RBP4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 FCN2Q15485 313 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC5A12Q1EHB4 618 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 GGTA1PQ4G0N0 100 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 TEX44Q53QW1 395 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 C10orf120Q5SQS8 335 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 LEMD1Q68G75 181 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF343Q6P1L6 599 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 REG3GQ6UW15 175 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 CCBE1Q6UXH8 406 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 EFL1Q7Z2Z2 1120 aaKnown RBP4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 TIPARPQ7Z3E1 657 aaKnown RBP4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 C16orf62Q7Z3J2 963 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 LRRC75A-AS1Q8N1F1 130 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 DHRSXQ8N5I4 330 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR4D5Q8NGN0 318 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZBED6CLQ96FA7 236 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 TMEM43Q9BTV4 400 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 CAPS2Q9BXY5 557 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 SMOXQ9NWM0 555 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 CLEC4AQ9UMR7 237 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 RASD1Q9Y272 281 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 OARD1Q9Y530 152 aa4.19□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF840PA6NDX5 716 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ACOD1A6NK06 481 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 CCDC169A6NNP5 214 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 FAM220BPB1ANY3 271 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 SHISA9B4DS77 424 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 PRRG1O14668 218 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF208O43345 1280 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 GJB5O95377 273 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 IGHV3-13P01766 116 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 CD55P08174 381 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ACVR1BP36896 505 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 SULT1E1P49888 294 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 OTUD4Q01804 1114 aaKnown RBP4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 TNFRSF17Q02223 184 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF154Q13106 437 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 CRMP1Q14194 572 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 DPYSL3Q14195 570 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 NDUFA9Q16795 377 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 TMEM52BQ4KMG9 183 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 BOLA3Q53S33 107 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 FAM120AOSQ5T036 256 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF600Q6ZNG1 722 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 GPRIN3Q6ZVF9 776 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 VSTM4Q8IW00 320 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 UBQLNLQ8IYU4 475 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR6T1Q8NGN1 323 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR9A4Q8NGU2 314 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF671Q8TAW3 534 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 RASL10AQ92737 203 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 PELI1Q96FA3 418 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 VGLL1Q99990 258 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC39A3Q9BRY0 314 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 KLK13Q9UKR3 277 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 SAMD4AQ9UPU9 718 aaKnown RBP4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 ALG6Q9Y672 507 aa4.18□□□□□ -1.74
HMGB1P46-201ENST00000520062 KANK1Q14678 1352 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 G3V3Y1 287 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 TAPBPO15533 448 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 GALR3O60755 368 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 B4GALT2O60909 372 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 N4BP1O75113 896 aaKnown RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 ALPIP09923 528 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 UMPSP11172 480 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 ELAVL3Q14576 367 aaKnown RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 MXD4Q14582 209 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 LAGE3Q14657 143 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 LTB4RQ15722 352 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 C14orf177Q52M58 125 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF57Q68EA5 555 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC25A42Q86VD7 318 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 SERPINA9Q86WD7 417 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC38A6Q8IZM9 456 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR1F12Q8NHA8 337 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 ADAMTS16Q8TE57 1224 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 CITED1Q99966 193 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 TM2D1Q9BX74 207 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 GCOM2Q9BZD3 368 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 PNNQ9H307 717 aaKnown RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 PPDPFQ9H3Y8 114 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 FN3KRPQ9HA64 309 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF581Q9P0T4 197 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 WRAP73Q9P2S5 460 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 PRODH2Q9UF12 536 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 PTBP2Q9UKA9 531 aaKnown RBP4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 L3MBTL1Q9Y468 752 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 FER1L5A0AVI2 2057 aa4.17□□□□□ -1.74
HMGB1P46-201ENST00000520062 PNPLA6Q8IY17 1366 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 A0A0U1RQS6 177 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 FAM240BA0A1B0GVZ2 78 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 SAGE2PA6NJ88 616 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 H0Y8G0 127 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 AP3B1O00203 1094 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms