RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 RIPPLY2Q5TAB7 128 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 ASPHD2Q6ICH7 369 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 MOB1BQ7L9L4 216 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 TMEM17Q86X19 198 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 ZBTB44Q8NCP5 570 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 OR10T2Q8NGX3 314 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 TRUB1Q8WWH5 349 aaKnown RBP3.25□□□□□ -1.89
SQLE-202ENST00000518604 BADQ92934 168 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 THUMPD2Q9BTF0 503 aaKnown RBP3.25□□□□□ -1.89
SQLE-202ENST00000518604 DUSP16Q9BY84 665 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 GSDMCQ9BYG8 508 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 SPRR3Q9UBC9 169 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 ANAPC7Q9UJX3 599 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 SMC3Q9UQE7 1217 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 TNRQ92752 1358 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 ESYT2A0FGR8 921 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 K7EPI3 171 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 CTAGE5O15320 804 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 NOL3O60936 208 aaKnown RBP3.24□□□□□ -1.89
SQLE-202ENST00000518604 LYPD3O95274 346 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 KRT8P05787 483 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 ACAA2P42765 397 aaKnown RBP3.24□□□□□ -1.89
SQLE-202ENST00000518604 SLC26A2P50443 739 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 LYZP61626 148 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 NDUFA9Q16795 377 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 TATDN3Q17R31 274 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 OR2B11Q5JQS5 317 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 FAHD2BQ6P2I3 314 aaPredicted RBP3.24□□□□□ -1.89
SQLE-202ENST00000518604 PRR22Q8IZ63 422 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 C11orf42Q8N5U0 333 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 NANPQ8TBE9 248 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 AENQ8WTP8 325 aaKnown RBP3.24□□□□□ -1.89
SQLE-202ENST00000518604 UBE2Q2Q8WVN8 375 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 TBC1D31Q96DN5 1066 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 FAHD2AQ96GK7 314 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 CITED1Q99966 193 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 YTHDF1Q9BYJ9 559 aaKnown RBP3.24□□□□□ -1.89
SQLE-202ENST00000518604 LIN28AQ9H9Z2 209 aaKnown RBP3.24□□□□□ -1.89
SQLE-202ENST00000518604 SLC35D1Q9NTN3 355 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 TMEM9Q9P0T7 183 aa3.24□□□□□ -1.89
SQLE-202ENST00000518604 A0A1W2PNV4 684 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 TMEM110-MUSTN1A8MSY1 372 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 IGHV3-23P01764 117 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 IGF1P05019 195 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 HEXBP07686 556 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 ASNSP08243 561 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 DESP17661 470 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 SERPINA2P20848 420 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 NMT1P30419 496 aaKnown RBP3.23□□□□□ -1.89
SQLE-202ENST00000518604 RPL29P47914 159 aaKnown RBP3.23□□□□□ -1.89
SQLE-202ENST00000518604 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 CHI3L2Q15782 390 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 RABGAP1LQ5R372 815 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 C9orf129Q5T035 196 aaKnown RBP3.23□□□□□ -1.89
SQLE-202ENST00000518604 SYT10Q6XYQ8 523 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 DNM1P46Q6ZS02 220 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 TMEM110Q86TL2 294 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 ZNF677Q86XU0 584 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 FBXO16Q8IX29 292 aaPredicted RBP3.23□□□□□ -1.89
SQLE-202ENST00000518604 TEX9Q8N6V9 391 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 ARNTL2Q8WYA1 636 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 PSMG2Q969U7 264 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 FGGYQ96C11 551 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 MAGEB18Q96M61 343 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 MAPKAP1Q9BPZ7 522 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 Q9H3A6 140 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 RIBC2Q9H4K1 309 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 EHD1Q9H4M9 534 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 CAB39LQ9H9S4 337 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 FARSBQ9NSD9 589 aaKnown RBP3.23□□□□□ -1.89
SQLE-202ENST00000518604 AIPL1Q9NZN9 384 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 WRAP73Q9P2S5 460 aaPredicted RBP3.23□□□□□ -1.89
SQLE-202ENST00000518604 ADAMTS9Q9P2N4 1935 aa3.23□□□□□ -1.89
SQLE-202ENST00000518604 SF3B1O75533 1304 aaKnown RBP eCLIP3.22□□□□□ -1.89
SQLE-202ENST00000518604 TP53BP1Q12888 1972 aaPredicted RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 ANGPT2O15123 496 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 STX7O15400 261 aaKnown RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 SMPD2O60906 423 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 LYPLA1O75608 230 aaPredicted RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 B3GAT3O94766 335 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 MBD3O95983 291 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 IFNB1P01574 187 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 SEMG1P04279 462 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 PSMB1P20618 241 aaKnown RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 ADORA2BP29275 332 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 DLSTP36957 453 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 KIR2DS2P43631 304 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 STARP49675 285 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 POLR2FP61218 127 aaKnown RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 OTUD4Q01804 1114 aaKnown RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 TPD52L1Q16890 204 aaPredicted RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 NCR3LG1Q68D85 454 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 FRA10AC1Q70Z53 315 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 APTXQ7Z2E3 356 aaKnown RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 DPY19L4Q7Z388 723 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 C17orf82Q86X59 251 aaPredicted RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 C11orf53Q8IXP5 236 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 C14orf178Q8N769 122 aaPredicted RBP3.22□□□□□ -1.89
SQLE-202ENST00000518604 OR2A12Q8NGT7 310 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms