RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LEMD1Q68G75 181 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TBC1D3GQ6DHY5 549 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CLEC6AQ6EIG7 209 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TANGO2Q6ICL3 276 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LAIR2Q6ISS4 152 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 KIAA1161Q6NSJ0 714 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPESP1Q6UW49 350 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PET117Q6UWS5 81 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MFSD7Q6UXD7 560 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RBMS3Q6XE24 437 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LBX2Q6XYB7 198 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 IL34Q6ZMJ4 242 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CYHR1Q6ZMK1 362 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MBOAT1Q6ZNC8 495 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MOB3CQ70IA8 216 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 AHSA2Q719I0 299 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 HIST2H3AQ71DI3 136 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMUB2Q71RG4 321 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 C16orf59Q7L2K0 433 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ARMCX2Q7L311 632 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC29A4Q7RTT9 530 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRP10Q7Z4F1 713 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 WDR53Q7Z5U6 358 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMCO2Q7Z6W1 182 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPR149Q86SP6 731 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM200AQ86VY9 491 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CACUL1Q86Y37 369 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPR65Q8IYL9 337 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR6V1Q8N148 313 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PQLC3Q8N755 202 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LMNTD1Q8N9Z9 388 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBAC2Q8NBM4 344 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 AQP11Q8NBQ7 271 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR11H4Q8NGC9 324 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR8J3Q8NGG0 315 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR52N4Q8NGI2 321 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR1J4Q8NGS1 313 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR10K1Q8NGX5 313 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LMO3Q8TAP4 145 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACTL9Q8TC94 416 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 GRHL3Q8TE85 626 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 C16orf78Q8WTQ4 265 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CA5BP1Q8WTZ4 195 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMAP2Q8WU79 429 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OIT3Q8WWZ8 545 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 IP6K1Q92551 441 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TFGQ92734 400 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 GCDHQ92947 438 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TAAR8Q969N4 342 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ARL11Q969Q4 196 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM125Q96AQ2 219 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TADA1Q96BN2 335 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRPL38Q96DV4 380 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM120BQ96EK7 910 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LCORQ96JN0 433 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 KCTD7Q96MP8 289 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPATA13Q96N96 652 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PITX2Q99697 317 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SOSTQ9BQB4 213 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 AIF1LQ9BQI0 150 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACBD6Q9BR61 282 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MESP1Q9BRJ9 268 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 WRAP53Q9BUR4 548 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ALG8Q9BVK2 526 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 POLDIP3Q9BY77 421 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 DPH1Q9BZG8 443 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CHST5Q9GZS9 411 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PCED1AQ9H1Q7 454 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MTIF3Q9H2K0 278 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBQLN3Q9H347 655 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRRN3Q9H3W5 708 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PPP1R3EQ9H7J1 279 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 KIR3DX1Q9H7L2 352 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PTGES2Q9H7Z7 377 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 IPPKQ9H8X2 491 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACTR8Q9H981 624 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 NMNAT1Q9HAN9 279 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC6A20Q9NP91 592 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RASL12Q9NYN1 266 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RBAKQ9NYW8 714 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF225Q9UK10 706 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRTO4Q9UKD2 239 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 FBXL3Q9UKT7 428 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRG3Q9Y2Y8 225 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZFP37Q9Y6Q3 630 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 C3P01024 1663 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 DICER1Q9UPY3 1922 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LAMB4A4D0S4 1761 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PXDNQ92626 1479 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MON2Q7Z3U7 1717 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DOCK2Q92608 1830 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 LOC285095A0A1B0GVY8 99 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 HYKKA2RU49 373 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRAMEF22A3QJZ6 481 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 AGAP14A8MT82 685 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 VSTM5A8MXK1 200 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CDRT15L2A8MXV6 281 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms