RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 FAM110BQ8TC76 370 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 DTX3LQ8TDB6 740 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 GPR119Q8TDV5 335 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 SELENOMQ8WWX9 145 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ARPC1AQ92747 370 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZUFSPQ96AP4 578 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 HVCN1Q96D96 273 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 SPACA9Q96E40 222 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 PGM2Q96G03 612 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 LINC00615Q96LM1 132 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 IGF2BP2-AS1Q96M15 143 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 AK8Q96MA6 479 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 CMTM3Q96MX0 182 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF830Q96NB3 372 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 OR4F4Q96R69 305 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 SEPHS2Q99611 448 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 TSG101Q99816 390 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 PRMT1Q99873 361 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 TXNDC17Q9BRA2 123 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 FTOQ9C0B1 505 aaKnown RBP eCLIP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 OR11A1Q9GZK7 315 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 PAIP1Q9H074 479 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ABCG8Q9H221 673 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 TSPY26PQ9H489 355 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 XKR8Q9H6D3 395 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 YY1AP1Q9H869 796 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 NOL11Q9H8H0 719 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 LINC00574Q9H8X3 128 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 RPF1Q9H9Y2 349 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 NRN1Q9NPD7 142 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 PNPLA3Q9NST1 481 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNRD1Q9P1U0 126 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 VPS18Q9P253 973 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF492Q9P255 531 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 TXNDC16Q9P2K2 825 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 MBD2Q9UBB5 411 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 RNF14Q9UBS8 474 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 NOCTQ9UK39 431 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 CPSF3Q9UKF6 684 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 IKZF2Q9UKS7 526 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 EMCNQ9ULC0 261 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 NPIPA1Q9UND3 350 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 TMED7Q9Y3B3 224 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 SESN1Q9Y6P5 492 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 COL4A2P08572 1712 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 ABCA2Q9BZC7 2435 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 KCPQ6ZWJ8 1503 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 STRCP1A6NGW2 1772 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 HECTD4Q9Y4D8 3996 aa-0.65□□□□□ -2.51
SNORA40.17-201ENST00000517256 MPDZO75970 2070 aa-0.66□□□□□ -2.51
SNORA40.17-201ENST00000517256 IGKV1OR2-108A0A075B7D4 117 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 A0A087WZY1 265 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGHV3-66A0A0C4DH42 116 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGHV5-10-1A0A0J9YXX1 117 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SMIM28A0A1B0GU29 152 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 A0A1B0GVI7 797 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ATP6AP2A0A1C7CYW4 349 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ANKDD1BA6NHY2 528 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SAGE2PA6NJ88 616 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 LRRC72A6NJI9 287 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 E9PLD3 99 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 INS-IGF2F8WCM5 200 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 H0YHG0 523 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 H7C0S8 307 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 POLR1CO15160 346 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RANBP6O60518 1105 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CABYRO75952 493 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 H6PDO95479 791 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CPSF4O95639 269 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CHRNA1P02708 482 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PGK2P07205 417 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ASGR1P07306 291 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CD55P08174 381 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CTSGP08311 255 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGHV1-8P0DP01 117 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GHRP10912 638 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 TDGF1P13385 188 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ICAM2P13598 275 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZNF30P17039 623 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ERCC2P18074 760 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SDC1P18827 310 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 MAT2AP31153 395 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 OTX1P32242 354 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SHMT2P34897 504 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GCKP35557 465 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PRKCIP41743 596 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GLP1RP43220 463 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 MAGEA6P43360 314 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 OR3A3P47888 321 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RPL29P47914 159 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 MT4P47944 62 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GMPSP49915 693 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 TDGF1P3P51864 188 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PRRX1P54821 245 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 KLF3P57682 345 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RPP38P78345 283 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 MRPS11P82912 194 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GALK2Q01415 458 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RBPJQ06330 500 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 DDX10Q13206 875 aaKnown RBP-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms