RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SLC26A1Q9H2B4 701 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 CNOT2Q9NZN8 540 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 DHCR7Q9UBM7 475 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 MRTO4Q9UKD2 239 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 RARRES3Q9UL19 164 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PPIEQ9UNP9 301 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 DTX4Q9Y2E6 619 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 MAU2Q9Y6X3 613 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 WDFY4Q6ZS81 3184 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 RALGAPA1Q6GYQ0 2036 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 HEATR5AQ86XA9 2040 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 EFCAB10A6NFE3 127 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 VSTM2BA6NLU5 285 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 EFCAB7A8K855 629 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZNF99A8MXY4 864 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 FRS3O43559 492 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 XPNPEP2O43895 674 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 CDC123O75794 336 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 NGFRP08138 427 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 POU2F1P14859 743 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ENDOUP21128 410 aaKnown RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 ACP1P24666 158 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 HTR2AP28223 471 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 GSTT1P30711 240 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 RBM34P42696 430 aaKnown RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 ACAA2P42765 397 aaKnown RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 SLC15A1P46059 708 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 GIPRP48546 466 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 TMBIM6P55061 237 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 CTBP2P56545 445 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 DAB2P98082 770 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 EMX1Q04741 257 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 PRKCDQ05655 676 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZFP36L1Q07352 338 aaKnown RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 IL11RAQ14626 422 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 OR1Q1Q15612 314 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 KLHL26Q53HC5 615 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 SYT6Q5T7P8 510 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 MEDAGQ5VYS4 303 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 RNLSQ5VYX0 342 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 CASP12Q6UXS9 341 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 LINC00114Q6XXX2 140 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZNF730Q6ZMV8 503 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 Q6ZPB1 254 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 TMPRSS11FQ6ZWK6 438 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 RRM2BQ7LG56 351 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 OVCH1Q7RTY7 1134 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 PRICKLE2Q7Z3G6 844 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 HMGN2P46Q86SG4 172 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZAR1Q86SH2 424 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 NKAIN4Q8IVV8 208 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 CCDC103Q8IW40 242 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 SLC43A2Q8N370 569 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 FAM26EQ8N5C1 309 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZNF540Q8NDQ6 660 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 FAM71CQ8NEG0 241 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 OR1N1Q8NGS0 311 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 C9orf43Q8TAL5 461 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 SLC2A12Q8TD20 617 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 DOK4Q8TEW6 326 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 FAR1Q8WVX9 515 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 FCGR1BQ92637 280 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ADIPOR1Q96A54 375 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 LCORQ96JN0 433 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 CCDC74BQ96LY2 380 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 LRFN5Q96NI6 719 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZNF426Q9BUY5 554 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 YIPF3Q9GZM5 350 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 TMEM27Q9HBJ8 222 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 EXOSC3Q9NQT5 275 aaKnown RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 RASSF1Q9NS23 344 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 SLC22A11Q9NSA0 550 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 CLN6Q9NWW5 311 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 IMPAD1Q9NX62 359 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 DNAJB12Q9NXW2 375 aaKnown RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 IL20Q9NYY1 176 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ERVK-18Q9QC07 812 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 ZNF223Q9UK11 482 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 ATXN7L1Q9ULK2 861 aaPredicted RBP7.73□□□□□ -1.17
RNF4-220ENST00000513578 TMEM5Q9Y2B1 443 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 SLC35A3Q9Y2D2 325 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 CLCA3PQ9Y6N3 262 aa7.73□□□□□ -1.17
RNF4-220ENST00000513578 A0A0B4J2E0 115 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 A0A1B0GX12 115 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 A0A1W2PQD3 144 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 OR2W5A6NFC9 320 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 SERINC4A6NH21 518 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 CLDN24A6NM45 220 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PATE3B3GLJ2 98 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 D6RAR5 112 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PTGES3LE9PB15 166 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 CHP2O43745 196 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 AHCYL1O43865 530 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 TRMUO75648 421 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 SCRG1O75711 98 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 IGF2P01344 180 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 CDK1P06493 297 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PRG2P13727 222 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 TBXA2RP21731 343 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms