RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CTAGE4Q8IX94 777 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 UBQLNLQ8IYU4 475 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 C17orf53Q8N3J3 647 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 CNEP1R1Q8N9A8 125 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 CDC26Q8NHZ8 85 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 UHMK1Q8TAS1 419 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 FAM76AQ8TAV0 307 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 ACMSDQ8TDX5 336 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 RNF138Q8WVD3 245 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 PIGTQ969N2 578 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 GFM2Q969S9 779 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 EFHD2Q96C19 240 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 L3HYPDHQ96EM0 354 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 PGM2Q96G03 612 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 C18orf12Q96KH6 178 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 FAM111AQ96PZ2 611 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TMEM237Q96Q45 408 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 PIP5K1AQ99755 562 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 PIGQQ9BRB3 760 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 MED18Q9BUE0 208 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 IQCGQ9H095 443 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 DSN1Q9H410 356 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 Q9N2J8 555 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 FANCFQ9NPI8 374 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 DDX18Q9NVP1 670 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 FAM120CQ9NX05 1096 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 SIRT5Q9NXA8 310 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 ELOVL5Q9NYP7 299 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TAS2R7Q9NYW3 318 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TMEM216Q9P0N5 145 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 C19orf53Q9UNZ5 99 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 RPH3AQ9Y2J0 694 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 ZNF175Q9Y473 711 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TESMINQ9Y4I5 508 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 ROS1P08922 2347 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 COL6A5A8TX70 2615 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 STAB1Q9NY15 2570 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 CSPG4Q6UVK1 2322 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 MYO1GB0I1T2 1018 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 C16orf97H3BN30 126 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 CTIFO43310 598 aaKnown RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 EMC8O43402 210 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 SCO2O43819 266 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 FADS1O60427 444 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 SMPD2O60906 423 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 CRCPO75575 148 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 TNFSF13O75888 250 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 KCNH1O95259 989 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 IL33O95760 270 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 INHBBP09529 407 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 IFI6P09912 130 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 POU2F1P14859 743 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 TCEA1P23193 301 aaKnown RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 MC3RP41968 323 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 KCNJ5P48544 419 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 HTR6P50406 440 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 B3GALT5-AS1P59052 145 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 BTKQ06187 659 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 VPS26BQ4G0F5 336 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 CFAP157Q5JU67 520 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 IKBIPQ70UQ0 350 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 P3H2Q8IVL5 708 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 HOMEZQ8IX15 550 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 IFT20Q8IY31 132 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 LRRC75A-AS1Q8N1F1 130 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 FADS6Q8N9I5 356 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 NOA1Q8NC60 698 aaKnown RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 WFDC11Q8NEX6 87 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 OR2M3Q8NG83 312 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 OR7G2Q8NG99 324 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 STARD4Q96DR4 205 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 C11orf24Q96F05 449 aaPredicted RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 APIPQ96GX9 242 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 ZNF845Q96IR2 970 aaPredicted RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 METTL2AQ96IZ6 378 aaKnown RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 C16orf45Q96MC5 204 aaPredicted RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 PINK1Q9BXM7 581 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 TBL1XR1Q9BZK7 514 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 ANKRA2Q9H9E1 313 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 GCM1Q9NP62 436 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 MYNNQ9NPC7 610 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 RRAGDQ9NQL2 400 aaPredicted RBP6.47□□□□□ -1.37
USP46-208ENST00000512656 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 DCDC2Q9UHG0 476 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 EXPH5Q8NEV8 1989 aa6.47□□□□□ -1.37
USP46-208ENST00000512656 A0A087WZY1 265 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 OR2M5A3KFT3 312 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 SEC14L5O43304 696 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 NME6O75414 186 aaPredicted RBP6.46□□□□□ -1.38
USP46-208ENST00000512656 RSL1D1O76021 490 aaKnown RBP6.46□□□□□ -1.38
USP46-208ENST00000512656 JUNP05412 331 aaKnown RBP6.46□□□□□ -1.38
USP46-208ENST00000512656 MYL2P10916 166 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 PPP3CBP16298 524 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 TBXA2RP21731 343 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 CRYGSP22914 178 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 ECHS1P30084 290 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 UGT2B10P36537 528 aa6.46□□□□□ -1.38
USP46-208ENST00000512656 PSG6Q00889 435 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms