RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RGS1Q08116 209 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ST3GAL3Q11203 375 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ZNF154Q13106 437 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 SELPLGQ14242 412 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ATXN7L3Q14CW9 347 aaPredicted RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 TPSAB1Q15661 275 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PDK4Q16654 411 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 CYP51A1Q16850 503 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 TIMM50Q3ZCQ8 353 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 GGTA1PQ4G0N0 100 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PVRIGQ6DKI7 326 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 CGB2Q6NT52 195 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ACSM5Q6NUN0 579 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 C9orf40Q8IXQ3 194 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 FAM133AQ8N9E0 248 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 Q8N9G6 341 aaPredicted RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 DENND6BQ8NEG7 585 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 OR5L2Q8NGL0 311 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PNPT1Q8TCS8 783 aaKnown RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 RAET1EQ8TD07 263 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 VN1R17PQ8TDU5 208 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 FAM3CQ92520 227 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PPP1R16AQ96I34 528 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ZIM3Q96PE6 472 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ZSCAN5AQ9BUG6 496 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 NFKBIZQ9BYH8 718 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 OPN3Q9H1Y3 402 aaPredicted RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 RMND5AQ9H871 391 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ELOVL3Q9HB03 270 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 MIEF1Q9NQG6 463 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 EXOSC3Q9NQT5 275 aaKnown RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 TNFRSF19Q9NS68 423 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.37□□□□□ -2.03
CHD1-207ENST00000511628 IMPAD1Q9NX62 359 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 CYTH4Q9UIA0 394 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 GMPPBQ9Y5P6 360 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 KDRP35968 1356 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 IGHV3-35A0A0C4DH35 117 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 FAM220BPB1ANY3 271 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 H0YCG3 227 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 K7EQM0 130 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 CLDN5O00501 218 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 TBX19O60806 448 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 SCRG1O75711 98 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 IDH1O75874 414 aaKnown RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 MFN2O95140 757 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 CA1P00915 261 aaPredicted RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 H2AFXP16104 143 aaPredicted RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 IGHV1-2P23083 117 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 MAGEA9P43362 315 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 HNMTP50135 292 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 EMDP50402 254 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 PLA2G16P53816 162 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 LYZP61626 148 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 UBE2HP62256 183 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 NTHL1P78549 312 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 Q1RN00 199 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 BLOC1S2Q6QNY1 142 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 PPP1R42Q7Z4L9 355 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 SERINC5Q86VE9 423 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 IFNEQ86WN2 208 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 TMEM17Q86X19 198 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 ERICH1Q86X53 443 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 TBC1D21Q8IYX1 336 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 MCOLN2Q8IZK6 566 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 CSNK1A1LQ8N752 337 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 ZSCAN4Q8NAM6 433 aaPredicted RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 SPRYD4Q8WW59 207 aaPredicted RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 NOL4LQ96MY1 436 aaPredicted RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 ZNF607Q96SK3 696 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 TXN2Q99757 166 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 ALG12Q9BV10 488 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 ABCB10Q9NRK6 738 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 MRPL39Q9NYK5 338 aaKnown RBP2.36□□□□□ -2.03
CHD1-207ENST00000511628 EHFQ9NZC4 300 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 GALPQ9UBC7 116 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 Q9UF83 564 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 TBK1Q9UHD2 729 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 RSPH14Q9UHP6 348 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 NAALAD2Q9Y3Q0 740 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 L3MBTL1Q9Y468 752 aa2.36□□□□□ -2.03
CHD1-207ENST00000511628 A8MUI8 341 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 FCN1O00602 326 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 BCAS1O75363 584 aaPredicted RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 SPAG6O75602 509 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 DUSP14O95147 198 aaKnown RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 UGT2B4P06133 528 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 HBQ1P09105 142 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 BCKDHAP12694 445 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 PGAM2P15259 253 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 HNF1AP20823 631 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 TBXA2RP21731 343 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 PCMT1P22061 227 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 DRD3P35462 400 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 HPCAL1P37235 193 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 STARP49675 285 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 KCNJ11Q14654 390 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 LAGE3Q14657 143 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms