RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 A0A096LPK6 155 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 HMX2A2RU54 273 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 TTC36A6NLP5 189 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 UTS2O95399 124 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 OTCP00480 354 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ADAP00813 363 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 RPS17P08708 135 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CSF3P09919 207 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ME2P23368 584 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 IGFBP5P24593 272 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 STX2P32856 288 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 TTKP33981 857 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 GZMKP49863 264 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CDH11P55287 796 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CARD18P57730 90 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 C21orf58P58505 322 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 MRPS25P82663 173 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 SLC7A5Q01650 507 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CALCOCO2Q13137 446 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 HEPACAMQ14CZ8 416 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF239Q16600 458 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 PLPPR5Q32ZL2 321 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CPTPQ5TA50 214 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 MROH9Q5TGP6 573 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 LIPNQ5VXI9 398 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 LETMD1Q6P1Q0 360 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 Q6ZT83 130 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 BHLHA15Q7RTS1 189 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 NUFIP2Q7Z417 695 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 TRABD2AQ86V40 505 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ARIH2OSQ8N7S6 290 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 BANPQ8N9N5 519 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ACTRT2Q8TDY3 377 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 C10orf105Q8TEF2 133 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 ABHD3Q8WU67 409 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 FAM168AQ92567 244 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 OSTF1Q92882 214 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CPNE4Q96A23 557 aaPredicted RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 REXO5Q96IC2 774 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 KLHL15Q96M94 604 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 RNF145Q96MT1 663 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 BBS4Q96RK4 519 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 NPAS1Q99742 590 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 LMF2Q9BU23 707 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 CBLN4Q9NTU7 201 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
NEDD9-211ENST00000508546 KCNS2Q9ULS6 477 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 NFU1Q9UMS0 254 aa8.32□□□□□ -1.08
NEDD9-211ENST00000508546 A0A1W2PRB8 838 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 FAM187AA6NFU0 413 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 MYO1GB0I1T2 1018 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF814B7Z6K7 855 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 ALG1L2C9J202 215 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 H7C417 338 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 UPK1AO00322 258 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 ABCD4O14678 606 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 GMFGO60234 142 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 PCDH7O60245 1069 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 OPN1LWP04000 364 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 NGFRP08138 427 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 RBP1P09455 135 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 IFI6P09912 130 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 USF1P22415 310 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-211ENST00000508546 GSTM5P46439 218 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 RAE1P78406 368 aaKnown RBP8.31□□□□□ -1.08
NEDD9-211ENST00000508546 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.083e-7■■□□□ 13
NEDD9-211ENST00000508546 GUCY2DQ02846 1103 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 SQLEQ14534 574 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 PPA1Q15181 289 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 RAB35Q15286 201 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 ZNHIT3Q15649 155 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-211ENST00000508546 GRAMD1BQ3KR37 738 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 FAM174BQ3ZCQ3 159 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 TIMM23BQ5SRD1 257 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 FAM166AQ6J272 317 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 GALNT18Q6P9A2 607 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 C12orf54Q6X4T0 127 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 Q6ZSR9 355 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 P2RY8Q86VZ1 359 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 IFT20Q8IY31 132 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 PLD6Q8N2A8 252 aaKnown RBP8.31□□□□□ -1.08
NEDD9-211ENST00000508546 OR2L13Q8N349 312 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF525Q8N782 197 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 C16orf78Q8WTQ4 265 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 SLC9A6Q92581 669 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 MUCL1Q96DR8 90 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 DHRS9Q9BPW9 319 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 RAB17Q9H0T7 212 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 MANSC1Q9H8J5 431 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 C3orf14Q9HBI5 128 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 TIGARQ9NQ88 270 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 MED17Q9NVC6 651 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF225Q9UK10 706 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 MGAT4BQ9UQ53 548 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 NUP214P35658 2090 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-211ENST00000508546 RYR3Q15413 4870 aa8.31□□□□□ -1.08
NEDD9-211ENST00000508546 GNG14A0A1W2PPG7 69 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms