RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RNF170Q96K19 258 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 RBBP8Q99708 897 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF426Q9BUY5 554 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 TRMT61BQ9BVS5 477 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 BEX2Q9BXY8 128 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 ZYG11BQ9C0D3 744 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 PIGUQ9H490 435 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 HRASLSQ9HDD0 168 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 MYOZ1Q9NP98 299 aaPredicted RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 CYSLTR2Q9NS75 346 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 ACOXLQ9NUZ1 547 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 GPR83Q9NYM4 423 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 NDRG2Q9UN36 371 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 WDR45Q9Y484 360 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 HCFC2Q9Y5Z7 792 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 PLEKHG1Q9ULL1 1385 aa6.9□□□□□ -1.31
PDGFRA-206ENST00000508170 TMEM8BA6NDV4 472 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 LINC00587B1AMM8 73 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 H3BNX3 289 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC28A2O43868 658 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TXNDC12O95881 172 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 AMPD1P23109 780 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 AP1S2P56377 157 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 CRYZQ08257 329 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 DPYSL3Q14195 570 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 DUOXA2Q1HG44 320 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF528Q3MIS6 628 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 GGTA1PQ4G0N0 100 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 WASHC2DQ5SRD0 308 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF770Q6IQ21 691 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 MFSD12Q6NUT3 480 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 DOK6Q6PKX4 331 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 NPSR1Q6W5P4 371 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 IRF2BP2Q7Z5L9 587 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 KCNMB4Q86W47 210 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 C16orf71Q8IYS4 520 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 METTL4Q8N3J2 472 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 CDRT4Q8N9R6 151 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC37A3Q8NCC5 494 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PHF10Q8WUB8 498 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PELI1Q96FA3 418 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 MDFIQ99750 246 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ALX4Q9H161 411 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TRABDQ9H4I3 376 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 GPN2Q9H9Y4 310 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SAP30LQ9HAJ7 183 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PLEKHJ1Q9NW61 149 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PADI3Q9ULW8 664 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 DHDHQ9UQ10 334 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 RIPK3Q9Y572 518 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PITPNM2Q9BZ72 1349 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ARHGEF10O15013 1369 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 FMN2Q9NZ56 1722 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 CEP170BQ9Y4F5 1589 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 A0A087X1B8 175 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 FRG2CA6NGY1 282 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PLPP2O43688 288 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TPST2O60704 377 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 MED6O75586 246 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 RCBTB2O95199 551 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TCRBP04435 133 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ALDOCP09972 364 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 GFAPP14136 432 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 HOXB9P17482 250 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PSMC3P17980 439 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 C21orf33P30042 268 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SHMT2P34897 504 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 HSD17B3P37058 310 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 RAP2BP61225 183 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ERVK11-1P61568 191 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PRR20EP86478 221 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PRR20CP86479 221 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PRR20DP86480 221 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PRR20BP86481 221 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PRR20AP86496 221 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 VLDLRP98155 873 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF45Q02386 682 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TNFRSF9Q07011 255 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PDIA2Q13087 525 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TAF1AQ15573 450 aaPredicted RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 HLFQ16534 295 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 UTF1Q5T230 341 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 DDI2Q5TDH0 399 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 EFCAB12Q6NXP0 572 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ABHD13Q7L211 337 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 GPSM1Q86YR5 675 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 LAS2Q8IYD9 372 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 TDHQ8IZJ6 230 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 CFAP52Q8N1V2 620 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 C8orf31Q8N9H6 132 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 OR2L5Q8NG80 312 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 HAS1Q92839 578 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC35C1Q96A29 364 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC22A12Q96S37 553 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 FUCA2Q9BTY2 467 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 SEMA6CQ9H3T2 930 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 PLEKHA1Q9HB21 404 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms