RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NHSL2Q5HYW2 709 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 WIPI1Q5MNZ9 446 aaPredicted RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 ZNF585AQ6P3V2 769 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 TNFAIP8L2Q6P589 184 aaPredicted RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 ENPP6Q6UWR7 440 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 CLEC18BQ6UXF7 455 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 MTERF4Q7Z6M4 381 aaKnown RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 YRDCQ86U90 279 aaKnown RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 CD163Q86VB7 1156 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 IFNEQ86WN2 208 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 RNF130Q86XS8 419 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 CLEC18CQ8NCF0 446 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 CHDHQ8NE62 594 aaPredicted RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 FAM83FQ8NEG4 500 aaPredicted RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 OR2M3Q8NG83 312 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 OR9I1Q8NGQ6 314 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 ZFP90Q8TF47 636 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 GTF2H4Q92759 462 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 ABTB1Q969K4 478 aaPredicted RBP6.61□□□□□ -1.35
GYPB-206ENST00000506516 VPS33AQ96AX1 596 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 TIMP4Q99727 224 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 VKORC1Q9BQB6 163 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 TMEM120AQ9BXJ8 343 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 SLC6A15Q9H2J7 730 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 RAD21L1Q9H4I0 556 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 SERHLQ9NQF3 203 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 FGFR1OP2Q9NVK5 253 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 ALKBH4Q9NXW9 302 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 FLRT3Q9NZU0 649 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 MED11Q9P086 117 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 TINAGQ9UJW2 476 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 DKKL1Q9UK85 242 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 LIPT1Q9Y234 373 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 MEMO1Q9Y316 297 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 LIPGQ9Y5X9 500 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 KCNE3Q9Y6H6 103 aa6.61□□□□□ -1.35
GYPB-206ENST00000506516 UBR5O95071 2799 aaPredicted RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 A0A087WZY1 265 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 A0A096LPE4 126 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 A0A096LPI6 279 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 IGLV3-32A0A0A0MS00 114 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 A0A1W2PP18 115 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 WIPF3A6NGB9 483 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 EVPLLA8MZ36 301 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 FAM47E-STBD1D6RA91 191 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 LINC01387J3KSC0 135 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 M0R082 166 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 GTPBP1O00178 669 aaKnown RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 CLIC1O00299 241 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 ZNHIT1O43257 154 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 WDR1O75083 606 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 BMP7P18075 431 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 PPIBP23284 216 aaKnown RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 CHMP24386 653 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 PTGER4P35408 488 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 DCTP40126 519 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 CRATP43155 626 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 ZFP36L2P47974 494 aaKnown RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 HPCAP84074 193 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 RCAN2Q14206 197 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 GNA13Q14344 377 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 GPR68Q15743 365 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 ZNF630Q2M218 657 aaPredicted RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 GLYR1Q49A26 553 aaPredicted RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 GPAT3Q53EU6 434 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 KLHL26Q53HC5 615 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 EIPR1Q53HC9 387 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 HEPHL1Q6MZM0 1159 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 XKRXQ6PP77 449 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 SLC2A7Q6PXP3 512 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 APOOLQ6UXV4 268 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 RPTNQ6XPR3 784 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 C20orf204Q6ZNR8 217 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 FGD2Q7Z6J4 655 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 FUNDC1Q8IVP5 155 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 CHERPQ8IWX8 916 aaKnown RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 FADS6Q8N9I5 356 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 OR5M9Q8NGP3 310 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 B4GALNT2Q8NHY0 566 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 ZNF417Q8TAU3 575 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 PHOSPHO1Q8TCT1 267 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 TSPEARQ8WU66 669 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 OIT3Q8WWZ8 545 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 PMM1Q92871 262 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 RAB8BQ92930 207 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 ROPN1LQ96C74 230 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 ZNF587Q96SQ5 575 aaPredicted RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 OR2B2Q9GZK3 357 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 NMUR2Q9GZQ4 415 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 MTHFD2LQ9H903 347 aaPredicted RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 TPT1P8Q9HAU6 139 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 POLE3Q9NRF9 147 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 PNPLA3Q9NST1 481 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 FBXO34Q9NWN3 711 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 COQ3Q9NZJ6 369 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 CALML5Q9NZT1 146 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 KLHL14Q9P2G3 628 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms