RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SH3BGRLO75368 114 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 KLHL18O94889 574 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 GJB5O95377 273 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SLC16A8O95907 504 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 MT-ND5P03915 603 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ASGR2P07307 311 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 RAB8AP61006 207 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SEC61A1P61619 476 aaKnown RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 FGL1Q08830 312 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ST3GAL3Q11203 375 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 FZD5Q13467 585 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 PGGHGQ32M88 737 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SPDYE7PQ495Y7 208 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 APCDD1Q8J025 514 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 OR5W2Q8NH69 310 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 CXorf40AQ8TE69 158 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SETD7Q8WTS6 366 aaKnown RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 C15orf40Q8WUR7 153 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 MRPS31Q92665 395 aaKnown RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ALG8Q9BVK2 526 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ACSS1Q9NUB1 689 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 TAS2R5Q9NYW4 299 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 PIPOXQ9P0Z9 390 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 FAM8A1Q9UBU6 413 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 PURGQ9UJV8 347 aaKnown RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 HELZP42694 1942 aaKnown RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 A0A087WUU8 490 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SULT1B1O43704 296 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SDC3O75056 442 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 HIST1H2ABP04908 130 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SYPP08247 313 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 CCR8P51685 355 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SNRPD1P62314 119 aaKnown RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 DGCR2P98153 550 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 HTR4Q13639 388 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 INSL4Q14641 139 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 UBXN2BQ14CS0 331 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 HIST3H2AQ7L7L0 130 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 TMCO2Q7Z6W1 182 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 RTN4RL1Q86UN2 441 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF280BQ86YH2 543 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF454Q8N9F8 522 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 OR11G2Q8NGC1 345 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 OR2AP1Q8NGE2 309 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 OR5M9Q8NGP3 310 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 SUN3Q8TAQ9 357 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 LINC01599Q8WXQ3 324 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 HIST1H2ACQ93077 130 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 ORAI1Q96D31 301 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 DPH7Q9BTV6 452 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 KRCC1Q9NPI7 259 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 PQLC2LA1A4F0 135 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 H0YC42 278 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 H7C2Y5 167 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 M0R3H8 397 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 SUSD5O60279 629 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 TGFB1P01137 390 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 GDNFP39905 211 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 MAZP56270 477 aaKnown RBP14.84□□□□□ -0.03
SCLT1-208ENST00000506368 ERVFC1P60507 584 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 GMFBP60983 142 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 OLFML2AQ68BL7 652 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 IL20RBQ6UXL0 311 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 B3GLCTQ6Y288 498 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 TMEM17Q86X19 198 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 OR2T33Q8NG76 320 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 OR6K2Q8NGY2 324 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 COQ8AQ8NI60 647 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 SLC38A3Q99624 504 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 NDC1Q9BTX1 674 aa14.84□□□□□ -0.03
SCLT1-208ENST00000506368 KLF16Q9BXK1 252 aaPredicted RBP14.84□□□□□ -0.03
SCLT1-208ENST00000506368 RSPO3Q9BXY4 272 aaPredicted RBP14.84□□□□□ -0.03
SCLT1-208ENST00000506368 TEX10Q9NXF1 929 aaPredicted RBP14.84□□□□□ -0.03
SCLT1-208ENST00000506368 A0A0G2JPF8 293 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 HNRNPCL2B2RXH8 293 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 HNRNPCL3B7ZW38 293 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 PRSS44E7EML9 344 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 NPC1O15118 1278 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 MID1O15344 667 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ADAM11O75078 769 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF821O75541 412 aaPredicted RBP14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ARL6IP5O75915 188 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 CXCL10P02778 98 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 MT-ND4P03905 459 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 WNT1P04628 370 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 URODP06132 367 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 HNRNPCL4P0DMR1 293 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 NR2F1P10589 423 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ALPPL2P10696 532 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 KHKP50053 298 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ARFIP1P53367 373 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 PCBP4P57723 403 aaKnown RBP14.83□□□□□ -0.03
SCLT1-208ENST00000506368 PSMA6P60900 246 aaKnown RBP14.83□□□□□ -0.03
SCLT1-208ENST00000506368 PRSS53Q2L4Q9 553 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 CCDC157Q569K6 752 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 UBE2NLQ5JXB2 153 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 PDSS1Q5T2R2 415 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 MPP7Q5T2T1 576 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms