RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 WDR26Q9H7D7 661 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 CYSLTR2Q9NS75 346 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 CUEDC1Q9NWM3 386 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RPS6KB2Q9UBS0 482 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 MLXQ9UH92 298 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 TET1Q8NFU7 2136 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 LOC100509620A0A075B734 347 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 A0A1W2PQ45 241 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 A0A1W2PQY0 241 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 GFYI3L273 518 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SEC14L5O43304 696 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 PRG2P13727 222 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ATF1P18846 271 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ACHEP22303 614 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 TRHRP34981 398 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 MMP12P39900 470 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NAA10P41227 235 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 GCGRP47871 477 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 KCNJ5P48544 419 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 GAS1P54826 345 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RIN1Q13671 783 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SHEQ5VZ18 495 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF322Q6U7Q0 402 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 TPRG1Q6ZUI0 275 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM25Q86YD3 366 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ARIH2OSQ8N7S6 290 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RASGEF1AQ8N9B8 481 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OR8S1Q8NH09 359 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 YIPF5Q969M3 257 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 C3orf49Q96BT1 292 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OTUB2Q96DC9 234 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 C4orf36Q96KX1 117 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 PDCD1LG2Q9BQ51 273 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 DPH7Q9BTV6 452 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 DPH1Q9BZG8 443 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM38AQ9H6F2 299 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 DMRT3Q9NQL9 472 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 MAN2C1Q9NTJ4 1040 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SEMA4GQ9NTN9 838 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ATPIF1Q9UII2 106 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SCP2D1Q9UJQ7 156 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SLC25A13Q9UJS0 675 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 A0A087WV48 116 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NPIPA5A0A0B4J1W7 369 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NPIPA7E9PJI5 369 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 RGS9O75916 674 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 UBXN7O94888 489 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NMBP08949 121 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 GKN3PP0CG01 181 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NPIPA8P0DM63 369 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 HMGA1P17096 107 aaKnown RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 SPINT3P49223 89 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 CAP1Q01518 475 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF169Q14929 603 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 C2orf68Q2NKX9 166 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ACSM3Q53FZ2 586 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 YOD1Q5VVQ6 348 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 HIST2H2AA3Q6FI13 130 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OAFQ86UD1 273 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 LRRC28Q86X40 367 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-208ENST00000504387 OR5W2Q8NH69 310 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF461Q8TAF7 563 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 HERVK_113Q902F9 699 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 LRRC46Q96FV0 321 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 PDXPQ96GD0 296 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 ZCCHC4Q9H5U6 513 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 NT5DC2Q9H857 520 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 FANCFQ9NPI8 374 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 HCFC1R1Q9NWW0 138 aa7.12□□□□□ -1.27
NEDD9-208ENST00000504387 DOCK6Q96HP0 2047 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 TRBV5-4A0A0C4DH59 114 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 A0A1B0GVI7 797 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 H0YIV9 168 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 STK25O00506 426 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CDC42EP2O14613 210 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 LATO43561 262 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 SLC19A2O60779 497 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 EFCAB14O75071 495 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 KLHL18O94889 574 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 HK1P19367 917 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 UQCRC2P22695 453 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 NOS3P29474 1203 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 DCTDP32321 178 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 PPM1FP49593 454 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 NCBP2P52298 156 aaKnown RBP eCLIP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 AP1S2P56377 157 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 KCNAB1Q14722 419 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CDKN3Q16667 212 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 DEFB115Q30KQ5 88 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM201Q5SNT2 666 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 FAM71E1Q6IPT2 247 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ZCCHC12Q6PEW1 402 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 OR51Q1Q8NH59 317 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 OR52I2Q8NH67 350 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 OR2M2Q96R28 347 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 NPAS1Q99742 590 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 KLF16Q9BXK1 252 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 OR2AG1Q9H205 316 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms