RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 RGCCQ9H4X1 137 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 NAALAD2Q9Y3Q0 740 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 SCN7AQ01118 1682 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 FOXE1O00358 373 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 C1SP09871 688 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ALDOCP09972 364 aaKnown RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 HOXD9P28356 352 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 FGF13Q92913 245 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF587Q96SQ5 575 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 PPIL3Q9H2H8 161 aaKnown RBP15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 INPP5EQ9NRR6 644 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 ADAM29Q9UKF5 820 aa15.55■□□□□ 0.08
PCDHA1-203ENST00000504120 PRSS38A1L453 326 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 AHRP35869 848 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 CLDN2P57739 230 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 MRPS10P82664 201 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 PDZD9Q8IXQ8 264 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 UTP4Q969X6 686 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 DNTTIP1Q9H147 329 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 CD207Q9UJ71 328 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 C17orf113A0A1B0GUU1 675 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 RBMS1P29558 406 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 HLA-FP30511 346 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 GARNL3Q5VVW2 1013 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 TMEM150AQ86TG1 271 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 ANKLE1Q8NAG6 615 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 CNOT9Q92600 299 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 TREX2Q9BQ50 279 aaPredicted RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 LMAN1LQ9HAT1 526 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 USP36Q9P275 1121 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 FAM171A2A8MVW0 826 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 SC5DO75845 299 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 SLC2A5P22732 501 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 FASLGP48023 281 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 EMP2P54851 167 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 PPA1Q15181 289 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 PCGF3Q3KNV8 242 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 CLEC14AQ86T13 490 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 OR52R1Q8NGF1 315 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 MAFIPQ8WZ33 124 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 OR51E2Q9H255 320 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 ERVK-19Q9WJR5 959 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 MYH10P35580 1976 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 GLI3P10071 1580 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 EDIL3O43854 480 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 HTR3AP46098 478 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 CYCSP99999 105 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 TAP2Q03519 686 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 ECH1Q13011 328 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 PIP5KL1Q5T9C9 394 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 METTL11BQ5VVY1 283 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 ELMOD2Q8IZ81 293 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 SDR9C7Q8NEX9 313 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 OR7D2Q96RA2 312 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 NUBP2Q9Y5Y2 271 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 AKAP11Q9UKA4 1901 aa15.54■□□□□ 0.08
PCDHA1-203ENST00000504120 GPR39O43194 453 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 XCR1P46094 333 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 TM4SF4P48230 202 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 SGSHP51688 502 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 FRMPD2BQ6IN97 320 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 TMEM163Q8TC26 289 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 TM9SF4Q92544 642 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 TOX2Q96NM4 488 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 PHB2Q99623 299 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 RBM24Q9BX46 236 aaKnown RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 BTBD2Q9BX70 525 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 EIF5A2Q9GZV4 153 aaKnown RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF334Q9HCZ1 680 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 LDB3O75112 727 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 CSF1P09603 554 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 ABHD17BQ5VST6 288 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 SLC6A19Q695T7 634 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 PODNL1Q6PEZ8 512 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 BORAQ6PGQ7 559 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 FAM198BQ6UWH4 519 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 NRAPQ86VF7 1730 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 METTL4Q8N3J2 472 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 HORMAD2Q8N7B1 307 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 EGLN2Q96KS0 407 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 A0A0G2JMP0 313 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 hCG_1807616A0A1W2PRN6 198 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 FUOMA2VDF0 154 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 PRAF2O60831 178 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 EGFP01133 1207 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 DRD5P21918 477 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 CASP6P55212 293 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 PRDX1Q06830 199 aaKnown RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 MELKQ14680 651 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 SF3A2Q15428 464 aaKnown RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 ANKRD54Q6NXT1 300 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 TMEM184AQ6ZMB5 413 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 OR4M2Q8NGB6 313 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 INTS14Q96SY0 518 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 SYNPO2LQ9H987 977 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 ZNF443Q9Y2A4 671 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 AK6Q9Y3D8 172 aaKnown RBP15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 CAPNS1P04632 268 aa15.53■□□□□ 0.08
PCDHA1-203ENST00000504120 UGT2B7P16662 529 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms