RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 CSF2P04141 144 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 RPN1P04843 607 aaKnown RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 RHOXF2BP0C7M4 288 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 BTDP43251 543 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 NSFP46459 744 aaKnown RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 IER3P46695 156 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 APOC4P55056 127 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 IFI35P80217 286 aaPredicted RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 UBXN1Q04323 297 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 PRSS8Q16651 343 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 HYAL4Q2M3T9 481 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 TCHHL1Q5QJ38 904 aaPredicted RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 BRINP3Q76B58 766 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 NEGR1Q7Z3B1 354 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 PIWIL3Q7Z3Z3 882 aaKnown RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 SPATA21Q7Z572 469 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 C4orf19Q8IY42 314 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 OR9A1PQ8NGU1 263 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 BSCL2Q96G97 398 aaPredicted RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 CEP170P1Q96L14 293 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 NOL4LQ96MY1 436 aaPredicted RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 CPXM1Q96SM3 734 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 INPP5KQ9BT40 448 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 EML4Q9HC35 981 aaKnown RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 LHX9Q9NQ69 397 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 TP53TG5Q9Y2B4 290 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 IFT52Q9Y366 437 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 PIK3C2AO00443 1686 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 PLCH2O75038 1416 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 LRP2P98164 4655 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 DNMBPQ6XZF7 1577 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 ABCA3Q99758 1704 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 MARF1Q9Y4F3 1742 aaKnown RBP0.61□□□□□ -2.31
SGMS1-205ENST00000498514 PCNX2A6NKB5 2137 aa0.61□□□□□ -2.31
SGMS1-205ENST00000498514 LRRC37A3O60309 1634 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DNMT1P26358 1616 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 COL22A1Q8NFW1 1626 aaPredicted RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 MAP3K5Q99683 1374 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 MAGI3Q5TCQ9 1506 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 LMTK2Q8IWU2 1503 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 THSD7AQ9UPZ6 1657 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TUBGCP6Q96RT7 1819 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TSPY2A6NKD2 308 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 KBTBD13C9JR72 458 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 EI24O14681 340 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 RANBP6O60518 1105 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 RCBTB2O95199 551 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 CPNE6O95741 557 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 IGHV3-48P01763 117 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TSPY3P0CV98 308 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TSPY4P0CV99 314 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TSPY8P0CW00 308 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TSPY10P0CW01 314 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 SDC1P18827 310 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 CYP3A5P20815 502 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 CACNG7P62955 275 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DPYSQ14117 519 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 SMC1AQ14683 1233 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 COG2Q14746 738 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 HEPACAMQ14CZ8 416 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TAF9Q16594 264 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 SHROOM1Q2M3G4 852 aaPredicted RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DEFB115Q30KQ5 88 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 PAGE3Q5JUK9 113 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 FAM91A1Q658Y4 838 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 UNC5DQ6UXZ4 953 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 PRPF39Q86UA1 669 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 GCNT2Q8N0V5 402 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 CYB561D1Q8N8Q1 229 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 IQUBQ8NA54 791 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 OR6J1Q8NGC5 347 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 AENQ8WTP8 325 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DNAJA3Q96EY1 480 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 COG3Q96JB2 828 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 RASL10BQ96S79 203 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 TXN2Q99757 166 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 NAA11Q9BSU3 229 aaPredicted RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 ZDHHC11Q9H8X9 412 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 SH2D2AQ9NP31 389 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 SAMHD1Q9Y3Z3 626 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 NPHP4O75161 1426 aaPredicted RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 USP6P35125 1406 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 EEA1Q15075 1411 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 SPHKAPQ2M3C7 1700 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 PEAK1Q9H792 1746 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 CCDC88AQ3V6T2 1871 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DNAH17Q9UFH2 4485 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DSTQ03001 7570 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 PLA2R1Q13018 1463 aa0.6□□□□□ -2.31
SGMS1-205ENST00000498514 DICER1Q9UPY3 1922 aaKnown RBP0.6□□□□□ -2.31
SGMS1-205ENST00000498514 MDN1Q9NU22 5596 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ADGRB3O60242 1522 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 DISP1Q96F81 1524 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 KIAA0586Q9BVV6 1533 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ALMS1Q8TCU4 4167 aa0.59□□□□□ -2.31
SGMS1-205ENST00000498514 POLR1AO95602 1720 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-205ENST00000498514 ITSN1Q15811 1721 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms