RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	ZCCHC18	P0CG32	403 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	HK1	P19367	917 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	HTR1E	P28566	365 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	CHI3L1	P36222	383 aa	Predicted RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	ZFP36L2	P47974	494 aa	Known RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	ANXA11	P50995	505 aa	Known RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	NUP107	P57740	925 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	RPS26	P62854	115 aa	Known RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	STX5	Q13190	355 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	ACSF3	Q4G176	576 aa	Predicted RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	FLYWCH1	Q4VC44	716 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	ATAD3B	Q5T9A4	648 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	RIPPLY2	Q5TAB7	128 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	NSUN5P2	Q63ZY6	315 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	SP5	Q6BEB4	398 aa	Predicted RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	HEPHL1	Q6MZM0	1159 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	ZNF621	Q6ZSS3	439 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	LACC1	Q8IV20	430 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	RPRML	Q8N4K4	120 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	OR5D16	Q8NGK9	328 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	C1GALT1C1	Q96EU7	318 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	MARK4	Q96L34	752 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	SFXN2	Q96NB2	322 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	EBF4	Q9BQW3	602 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	PIGQ	Q9BRB3	760 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	NMUR2	Q9GZQ4	415 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	OR51I1	Q9H343	314 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	CALHM2	Q9HA72	323 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	CAMK2A	Q9UQM7	478 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	RNF6	Q9Y252	685 aa		11.21	□□□□□ -0.61
MRPL55-233	ENST00000495899	DOPEY2	Q9Y3R5	2298 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	EXPH5	Q8NEV8	1989 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	HSPB2	A8KAH6	182 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899		C9JVG2	144 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	PRSS44	E7EML9	344 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	KRT75	O95678	551 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	PEPD	P12955	493 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	TIMP3	P35625	211 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	DCT	P40126	519 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	KHK	P50053	298 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	LHX2	P50458	406 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	ATP4B	P51164	291 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	B3GALT5-AS1	P59052	145 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	RCAN2	Q14206	197 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	HSPB2	Q16082	182 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	DCST1	Q5T197	706 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	C16orf62	Q7Z3J2	963 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	OR10Q1	Q8NGQ4	319 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	XAGE5	Q8WWM1	108 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	ITCH	Q96J02	903 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	INPP5K	Q9BT40	448 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	SAP130	Q9H0E3	1048 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	RABEP2	Q9H5N1	569 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	STOML1	Q9UBI4	398 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	LIPT1	Q9Y234	373 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	DTNA	Q9Y4J8	743 aa		11.2	□□□□□ -0.62
MRPL55-233	ENST00000495899	EML6	Q6ZMW3	1958 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	C7orf72	A4D263	438 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	C17orf51	A8MQB3	221 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	FCMR	O60667	390 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	OR12D1	P0DN82	309 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF708	P17019	499 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF17	P17021	662 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	CEACAM8	P31997	349 aa	Predicted RBP	11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ADH7	P40394	386 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	CDKN2C	P42773	168 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF41	P51814	821 aa	Predicted RBP	11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	SUMO3	P55854	103 aa	Predicted RBP	11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	EEFSEC	P57772	596 aa	Known RBP	11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	CDSN	Q15517	529 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF141	Q15928	474 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	TMEM44	Q2T9K0	475 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	RAET1L	Q5VY80	246 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	METTL21C	Q5VZV1	264 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	MEIOB	Q8N635	442 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	OR9I1	Q8NGQ6	314 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	B4GALNT2	Q8NHY0	566 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	PMM1	Q92871	262 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZBTB8A	Q96BR9	441 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ROPN1L	Q96C74	230 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF350	Q9GZX5	532 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	TRIM33	Q9UPN9	1127 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	AP4B1	Q9Y6B7	739 aa		11.19	□□□□□ -0.62
MRPL55-233	ENST00000495899	NIN	Q8N4C6	2090 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899		A0A0G2JNJ9	132 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	OR2M5	A3KFT3	312 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	MBD3L3	A6NE82	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899		H0Y3Z8	333 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	GTPBP1	O00178	669 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	HMGN4	O00479	90 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	HCRTR2	O43614	444 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	EIF4E2	O60573	245 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ANP32D	O95626	131 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	IL2RA	P01589	272 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	GSN	P06396	782 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	COL8A1	P27658	744 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms