RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293	WDFY3	Q8IZQ1	3526 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293		A0A0A6YYC8	382 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	IGKV1-8	A0A0C4DH67	115 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	LOC100653049	A0A140TA62	436 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	DPPA5	A6NC42	116 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CCDC160	A6NGH7	325 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	FAM90A20P	A6NIJ5	464 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ARGFX	A6NJG6	315 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293		E9PBE3	544 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293		H0YIG0	161 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293		H3BMH7	237 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	STX16-NPEPL1	H3BU86	382 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293		I3L1I5	382 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293		K7EPI3	171 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	UBXN8	O00124	270 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	PSMD12	O00232	456 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CLIC1	O00299	241 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SOCS2	O14508	198 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	STX16	O14662	325 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	AIM2	O14862	343 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	HDAC3	O15379	428 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CFLAR	O15519	480 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	HCRTR1	O43613	425 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	TMPRSS11D	O60235	418 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	KRT34	O76011	436 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	MBP	P02686	304 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	HEXB	P07686	556 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	UBTFL6	P0CB48	400 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SLC35E2B	P0CK96	405 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	COX4I1	P13073	169 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	IL10	P22301	178 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	F8A1	P23610	371 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SERPINB1	P30740	379 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	GGT5	P36269	586 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SLC6A12	P48065	614 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	NUDT2	P50583	147 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CCL11	P51671	97 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	EMP2	P54851	167 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	RPS18	P62269	152 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ROR2	Q01974	943 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CHIT1	Q13231	466 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	OR4D1	Q15615	310 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	GPR68	Q15743	365 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	PRTG	Q2VWP7	1150 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	LCE1E	Q5T753	118 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ATG9B	Q674R7	924 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	METTL2B	Q6P1Q9	378 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	TMIGD1	Q6UXZ0	262 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ZYG11A	Q6WRX3	759 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SH2D5	Q6ZV89	423 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	LRRC70	Q7Z2Q7	622 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	DHDDS	Q86SQ9	333 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ISCA2	Q86U28	154 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SPATA24	Q86W54	205 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ARMC8	Q8IUR7	673 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SRFBP1	Q8NEF9	429 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	OR4K1	Q8NGD4	311 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	OR2Y1	Q8NGV0	311 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ZCCHC10	Q8TBK6	192 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CREB3L4	Q8TEY5	395 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	KCTD4	Q8WVF5	259 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	TM9SF4	Q92544	642 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	DTNBP1	Q96EV8	351 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ZNF285	Q96NJ3	590 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	FYTTD1	Q96QD9	318 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	MRPL57	Q9BQC6	102 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ROGDI	Q9GZN7	287 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ING2	Q9H160	280 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SLC25A18	Q9H1K4	315 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SLC26A1	Q9H2B4	701 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	EHD1	Q9H4M9	534 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	NT5DC2	Q9H857	520 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	CLK4	Q9HAZ1	481 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	TCF7L2	Q9NQB0	619 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	PLSCR4	Q9NRQ2	329 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	C14orf105	Q9NVL8	296 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ADA2	Q9NZK5	511 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	STEAP1	Q9UHE8	339 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	PTBP2	Q9UKA9	531 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	IKZF3	Q9UKT9	509 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	VPS4A	Q9UN37	437 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	RAP2C	Q9Y3L5	183 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SLC22A7	Q9Y694	548 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	SPACA6	W5XKT8	324 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	IGF2R	P11717	2491 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	FRY	Q5TBA9	3013 aa		4.19	□□□□□ -1.74
RBM39-240	ENST00000495293	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	ANKRD12	Q6UB98	2062 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	CACNA1B	Q00975	2339 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	SMIM31	A0A1B0GVY4	71 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	SGK494	L7N484	410 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	CLDN4	O14493	209 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	TAPBP	O15533	448 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	LCMT2	O60294	686 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	NOL3	O60936	208 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	PTP4A3	O75365	173 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	GMNN	O75496	209 aa		4.18	□□□□□ -1.74
RBM39-240	ENST00000495293	LYPLA1	O75608	230 aa	Predicted RBP	4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms