RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 HS3ST4Q9Y661 456 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SMIM28A0A1B0GU29 152 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 TRBC2A0A5B9 178 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 TRAPPC13A5PLN9 417 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 H7C0S8 307 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CACNB4O00305 520 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 MAN2B1O00754 1011 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZNF197O14709 1029 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SCAMP1O15126 338 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PCDH7O60245 1069 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 OR10H3O60404 316 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SOX14O95416 240 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SIX6O95475 246 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 HEXAP06865 529 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 LIMS3P0CW19 117 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 LIMS4P0CW20 117 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SPP1P10451 314 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 TYMPP19971 482 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 GDF5P43026 501 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CRATP43155 626 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 OR1G1P47890 313 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 DCDP81605 110 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 BDH1Q02338 343 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 KLF9Q13886 244 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 MLF2Q15773 248 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 FAM76BQ5HYJ3 339 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ARMC12Q5T9G4 340 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZNF660Q6AZW8 331 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ALG1LQ6GMV1 187 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 LRRN1Q6UXK5 716 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 USP53Q70EK8 1073 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ASCL5Q7RTU5 278 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PIANPQ8IYJ0 282 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 RNF113BQ8IZP6 322 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 TMEM86AQ8N2M4 240 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 KLHL36Q8N4N3 616 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 OXR1Q8N573 874 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 BPIFCQ8NFQ6 507 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 OR52N2Q8NGI0 321 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 OR10K1Q8NGX5 313 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 C2orf15Q8WU43 125 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ASB13Q8WXK3 278 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 RAD51AP1Q96B01 352 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZDHHC12Q96GR4 267 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 RBM14Q96PK6 669 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PAPOLGQ9BWT3 736 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZYG11BQ9C0D3 744 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SLC32A1Q9H598 525 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CSNK1G1Q9HCP0 422 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZFP57Q9NU63 452 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CFAP97Q9P2B7 532 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PLXND1Q9Y4D7 1925 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 COL4A3Q01955 1670 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 RAB19A4D1S5 217 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 C2orf78A6NCI8 922 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 NEDD8-MDP1E9PL57 170 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SCAMP2O15127 329 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CREBL2O60519 120 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 OAZ2O95190 189 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PDGFBP01127 241 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 EGFP01133 1207 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 POMCP01189 267 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 IL5P05113 134 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SP9P0CG40 484 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 FOLR2P14207 255 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PSMB1P20618 241 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 FCARP24071 287 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PTAFRP25105 342 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 MTNR1AP48039 350 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PGDP52209 483 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CDK6Q00534 326 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 MPPE1Q53F39 396 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 RTP2Q5QGT7 225 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CPTPQ5TA50 214 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 WSCD1Q658N2 575 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZNF425Q6IV72 752 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 TRIM40Q6P9F5 258 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CD300LDQ6UXZ3 194 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 GLDNQ6ZMI3 551 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 SLC16A13Q7RTY0 426 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 LRRC70Q7Z2Q7 622 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 MAML2Q8IZL2 1156 aaPredicted RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 LINC00471Q8N535 108 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 NFKBIDQ8NI38 313 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PCED1BQ96HM7 432 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 TMEM41AQ96HV5 264 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 CRB3Q9BUF7 120 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ADGRE3Q9BY15 652 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 BTBD1Q9H0C5 482 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ENKD1Q9H0I2 346 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 EXOSC3Q9NQT5 275 aaKnown RBP6.61□□□□□ -1.35
EPHA3-203ENST00000494014 PPP1R14DQ9NXH3 145 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 RASL12Q9NYN1 266 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 MIOXQ9UGB7 285 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 FBXL3Q9UKT7 428 aa6.61□□□□□ -1.35
EPHA3-203ENST00000494014 ZNF106Q9H2Y7 1883 aaKnown RBP6.6□□□□□ -1.35
EPHA3-203ENST00000494014 KCNE1BA0A087WTH5 132 aa6.6□□□□□ -1.35
EPHA3-203ENST00000494014 TRBV4-1A0A0J9YWV2 114 aa6.6□□□□□ -1.35
EPHA3-203ENST00000494014 MTMR11A4FU01 709 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms