RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 OCRLQ01968 901 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 FAM27E3Q08E93 113 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 TP53BP2Q13625 1128 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 PDCD2Q16342 344 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF474Q6S9Z5 364 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-219ENST00000491183 CAMKMTQ7Z624 323 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 GTPBP8Q8N3Z3 284 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-219ENST00000491183 OR56A1Q8NGH5 318 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 POC1BQ8TC44 478 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 ACTRT2Q8TDY3 377 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 CHMP6Q96FZ7 201 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 PGM2Q96G03 612 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 SH3YL1Q96HL8 342 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-219ENST00000491183 PPP1R36Q96LQ0 422 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 DACH2Q96NX9 599 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 SORT1Q99523 831 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 DUSP26Q9BV47 211 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 CXXC4Q9H2H0 198 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 AKTIPQ9H8T0 292 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 MED17Q9NVC6 651 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 ASIC5Q9NY37 505 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 RAP2CQ9Y3L5 183 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 NPIPA5A0A0B4J1W7 369 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 C7orf72A4D263 438 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 SH3D21A4FU49 640 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 NPIPA7E9PJI5 369 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 TM9SF1O15321 606 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 OIP5O43482 229 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 AQP8O94778 261 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 OPN1LWP04000 364 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 NPIPA8P0DM63 369 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 HPGDP15428 266 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 CD1EP15812 388 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF17P17021 662 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 SLC6A8P48029 635 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 RPS3AP61247 264 aaKnown RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 MAD2L1Q13257 205 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 GUSBP1Q15486 140 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 SGCBQ16585 318 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 SMU1Q2TAY7 513 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 CTU2Q2VPK5 515 aaKnown RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 PLPPR5Q32ZL2 321 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 SPDYE7PQ495Y7 208 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 KLHL26Q53HC5 615 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 CEP85LQ5SZL2 805 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 MISPQ8IVT2 679 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 OR5AK3PQ8NH89 298 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 SFXN5Q8TD22 340 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 ADAMTS15Q8TE58 950 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 ADGRG7Q96K78 797 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 RNF145Q96MT1 663 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 ZIM3Q96PE6 472 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 FOXC2Q99958 501 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 OPN3Q9H1Y3 402 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 PLEKHF2Q9H8W4 249 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 HHATLQ9HCP6 504 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 NOP53Q9NZM5 478 aaKnown RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 FAF1Q9UNN5 650 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 PLEKHA6Q9Y2H5 1048 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-219ENST00000491183 ABCA4P78363 2273 aa16.17■□□□□ 0.18
HMGN1-219ENST00000491183 EIF1AYO14602 144 aaKnown RBP16.16■□□□□ 0.18
HMGN1-219ENST00000491183 CFLARO15519 480 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 HRGP04196 525 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 BGNP21810 368 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 CPOXP36551 454 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 SLC1A6P48664 564 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 RNF144AP50876 292 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-219ENST00000491183 PGS1Q32NB8 556 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 DCST2Q5T1A1 773 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGN1-219ENST00000491183 OR4F3Q6IEY1 312 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 CLECL1Q8IZS7 167 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 CLEC4FQ8N1N0 589 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF610Q8N9Z0 462 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 B4GALNT2Q8NHY0 566 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 ZBTB8AQ96BR9 441 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 MOAP1Q96BY2 351 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 OR7D2Q96RA2 312 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 CENPHQ9H3R5 247 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 NEUROD4Q9HD90 331 aa16.16■□□□□ 0.18
HMGN1-219ENST00000491183 A0A0J9YW62 118 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 A0A1W2PPR1 153 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 NPIPB9F8W1W9 429 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 ADAMDEC1O15204 470 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 EFNA2O43921 213 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 KRT16P08779 473 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 LINGO3P0C6S8 592 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 MYZAPP0CAP1 466 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 IL11P20809 199 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 ATP6V1C1P21283 382 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 EIF1AXP47813 144 aaKnown RBP16.15■□□□□ 0.18
HMGN1-219ENST00000491183 PCYT1AP49585 367 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 RPL14P50914 215 aaKnown RBP16.15■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF41P51814 821 aaPredicted RBP16.15■□□□□ 0.18
HMGN1-219ENST00000491183 RAC1P63000 192 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF117Q03924 483 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 POU4F3Q15319 338 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 FBXW10Q5XX13 1052 aa16.15■□□□□ 0.18
HMGN1-219ENST00000491183 CBLN3Q6UW01 205 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms