RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 JKAMPQ9P055 326 aa6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 SENP1Q9P0U3 644 aa6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 PPP4R1LQ9P1A2 415 aa6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 ZNF629Q9UEG4 869 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 KCNN3Q9UGI6 736 aa6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 DKKL1Q9UK85 242 aa6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 MRPS18CQ9Y3D5 142 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 HRNRQ86YZ3 2850 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-208ENST00000490653 VPS13CQ709C8 3753 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 OR2M5A3KFT3 312 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 EEF1E1-BLOC1S5C9J1V9 151 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 H0Y3Z8 333 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 H3BQF6 201 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 DVL2O14641 736 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 EEF1E1O43324 174 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 TBX19O60806 448 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 COQ9O75208 318 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 KCNK2O95069 426 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 ZWINTO95229 277 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 ANGPTL1O95841 491 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 C6orf47O95873 294 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 ZNF708P17019 499 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 GSTM5P46439 218 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 ASCL1P50553 236 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 DSCR4P56555 118 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 NAA20P61599 178 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 FAM27E3Q08E93 113 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 IFFO1Q0D2I5 559 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 PTGR1Q14914 329 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 POU4F3Q15319 338 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 DECR1Q16698 335 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 FBXL19-AS1Q494R0 122 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 XKR7Q5GH72 579 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 EXOSC6Q5RKV6 272 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 VWA1Q6PCB0 445 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 IFNEQ86WN2 208 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 POC1BQ8TC44 478 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 GPR151Q8TDV0 419 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 SMPDL3BQ92485 455 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 CAVIN3Q969G5 261 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 PPCDCQ96CD2 204 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 STARD4Q96DR4 205 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 ARSGQ96EG1 525 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 FAM120BQ96EK7 910 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 CXorf36Q9H7Y0 433 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 PPCSQ9HAB8 311 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 RASSF1Q9NS23 344 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 CCM2LQ9NUG4 571 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 GIN1Q9NXP7 522 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 NTMQ9P121 344 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 CLCF1Q9UBD9 225 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 ATP6V1HQ9UI12 483 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 WBP11Q9Y2W2 641 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 PRR14LQ5THK1 2151 aa6.59□□□□□ -1.35
PRPF4B-208ENST00000490653 FN1P02751 2386 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 A0A1W2PRB8 838 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 H3BML4 177 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SEC14L5O43304 696 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CTIFO43310 598 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 EMC8O43402 210 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 HCRTR2O43614 444 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 EFNA2O43921 213 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 TNFSF13O75888 250 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 AQP8O94778 261 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 OXSR1O95747 527 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 G6PDP11413 515 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 IL11P20809 199 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CHMP24386 653 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SHC1P29353 583 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 KIR2DL2P43627 348 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SLC6A8P48029 635 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 ART1P52961 327 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CASP9P55211 416 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SIRPAP78324 504 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 PHC1P78364 1004 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF844Q08AG5 666 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 RCAN2Q14206 197 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 LASP1Q14847 261 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CD226Q15762 336 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 TMEM44Q2T9K0 475 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 NDUFAF6Q330K2 333 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 RAET1LQ5VY80 246 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 MFSD12Q6NUT3 480 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 WDR93Q6P2C0 686 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF474Q6S9Z5 364 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 ENPP6Q6UWR7 440 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 LRIG3Q6UXM1 1119 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 RNF165Q6ZSG1 346 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 IKBIPQ70UQ0 350 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SZRD1Q7Z422 152 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CDC20BQ86Y33 519 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 NUDCD3Q8IVD9 361 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 RIBC1Q8N443 379 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF781Q8N8C0 355 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CDS1Q92903 461 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms