RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 BIRC5O15392 142 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 KIR2DL2P43627 348 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ZNF41P51814 821 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ABCE1P61221 599 aaKnown RBP20.69■□□□□ 0.9
COL9A3-213ENST00000489045 EMX2Q04743 252 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 BTLAQ7Z6A9 289 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 MISPQ8IVT2 679 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 GTPBP8Q8N3Z3 284 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-213ENST00000489045 OR5AK3PQ8NH89 298 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 SFXN5Q8TD22 340 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ADAMTS15Q8TE58 950 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ZBTB8AQ96BR9 441 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ZBTB9Q96C00 473 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 DACH2Q96NX9 599 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ZIM3Q96PE6 472 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 KLHDC3Q9BQ90 382 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 CENPHQ9H3R5 247 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 MED17Q9NVC6 651 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 GPATCH2Q9NW75 528 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 ASIC5Q9NY37 505 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 NOP53Q9NZM5 478 aaKnown RBP20.69■□□□□ 0.9
COL9A3-213ENST00000489045 FAF1Q9UNN5 650 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-213ENST00000489045 PLEKHA6Q9Y2H5 1048 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 EIF1AYO14602 144 aaKnown RBP20.68■□□□□ 0.9
COL9A3-213ENST00000489045 TM9SF1O15321 606 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 CFLARO15519 480 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 KRT16P08779 473 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 DHRS4L1P0CG22 281 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 ATP6V1C1P21283 382 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 SOAT1P35610 550 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 C21orf58P58505 322 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 OCRLQ01968 901 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 SGCBQ16585 318 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 PLPPR5Q32ZL2 321 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 CEP85LQ5SZL2 805 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 DCST2Q5T1A1 773 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 CAMKMTQ7Z624 323 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 B4GALNT2Q8NHY0 566 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 ACTRT2Q8TDY3 377 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 MOAP1Q96BY2 351 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 PGM2Q96G03 612 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 C20orf27Q9GZN8 174 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 OPN3Q9H1Y3 402 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-213ENST00000489045 STOML1Q9UBI4 398 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 RAB21Q9UL25 225 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 KCNE3Q9Y6H6 103 aa20.68■□□□□ 0.9
COL9A3-213ENST00000489045 NPIPA5A0A0B4J1W7 369 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 C7orf72A4D263 438 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 NPIPA7E9PJI5 369 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 GOSR1O95249 250 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 NPIPA8P0DM63 369 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 EIF1AXP47813 144 aaKnown RBP20.67■□□□□ 0.9
COL9A3-213ENST00000489045 CLDN8P56748 225 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 HBA1P69905 142 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 FAM27E3Q08E93 113 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 SMU1Q2TAY7 513 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 PGS1Q32NB8 556 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 PPP4R4Q6NUP7 873 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 WDR75Q8IWA0 830 aaKnown RBP20.67■□□□□ 0.9
COL9A3-213ENST00000489045 RNF145Q96MT1 663 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 SORT1Q99523 831 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 FOXC2Q99958 501 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 AKTIPQ9H8T0 292 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 RAP2CQ9Y3L5 183 aa20.67■□□□□ 0.9
COL9A3-213ENST00000489045 PRRC2AP48634 2157 aaKnown RBP20.67■□□□□ 0.9
COL9A3-213ENST00000489045 AQP8O94778 261 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 OPN1LWP04000 364 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 MYZAPP0CAP1 466 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 FCGR2AP12318 317 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 DNASE1P24855 282 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 PSMA4P25789 261 aaKnown RBP20.66■□□□□ 0.9
COL9A3-213ENST00000489045 SLC1A6P48664 564 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 RNF144AP50876 292 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-213ENST00000489045 ZNF117Q03924 483 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 MPP2Q14168 576 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 POU4F3Q15319 338 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 ZNF474Q6S9Z5 364 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-213ENST00000489045 PAMR1Q6UXH9 720 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 ZNF527Q8NB42 609 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 OR10D3Q8NH80 312 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 PHOSPHO1Q8TCT1 267 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 OR7D2Q96RA2 312 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 CXXC4Q9H2H0 198 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 NDRG3Q9UGV2 375 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 TESMINQ9Y4I5 508 aa20.66■□□□□ 0.9
COL9A3-213ENST00000489045 CGAP01215 116 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 HRGP04196 525 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 BGNP21810 368 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 CD79BP40259 229 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 SLC6A8P48029 635 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 RPL14P50914 215 aaKnown RBP20.65■□□□□ 0.9
COL9A3-213ENST00000489045 GUSBP1Q15486 140 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 CTU2Q2VPK5 515 aaKnown RBP20.65■□□□□ 0.9
COL9A3-213ENST00000489045 TNFAIP8L3Q5GJ75 292 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 OR4F3Q6IEY1 312 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 MTERF4Q7Z6M4 381 aaKnown RBP20.65■□□□□ 0.9
COL9A3-213ENST00000489045 CLECL1Q8IZS7 167 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 OR5D16Q8NGK9 328 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 POC1BQ8TC44 478 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 ADGRG7Q96K78 797 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms