RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PRDM14Q9GZV8 571 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 MED11Q9P086 117 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 MKLN1Q9UL63 735 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 WDR45Q9Y484 360 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 DTNAQ9Y4J8 743 aa16.93■□□□□ 0.3
PTCD3-217ENST00000488801 A0A1B0GUH1 482 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 GMNCA6NCL1 334 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 FXYD1O00168 92 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 ANGPT2O15123 496 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 OIP5O43482 229 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 DNAJA2O60884 412 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 TFPTP0C1Z6 253 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 GPX2P18283 190 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 PPIBP23284 216 aaKnown RBP16.92■□□□□ 0.3
PTCD3-217ENST00000488801 DPP4P27487 766 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 MSX1P28360 303 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 DSTNP60981 165 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 ZNF117Q03924 483 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 FGFBP1Q14512 234 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 MAPK14Q16539 360 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 PDZK1Q5T2W1 519 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 YRDCQ86U90 279 aaKnown RBP16.92■□□□□ 0.3
PTCD3-217ENST00000488801 GATSQ8NAP1 163 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 SARAFQ96BY9 339 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 ELAC2Q9BQ52 826 aaKnown RBP16.92■□□□□ 0.3
PTCD3-217ENST00000488801 UGT2B28Q9BY64 529 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 NSRP1Q9H0G5 558 aaKnown RBP16.92■□□□□ 0.3
PTCD3-217ENST00000488801 MYLK2Q9H1R3 596 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 RAD21L1Q9H4I0 556 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 LDAHQ9H6V9 325 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 THUMPD1Q9NXG2 353 aaKnown RBP16.92■□□□□ 0.3
PTCD3-217ENST00000488801 P2RX2Q9UBL9 471 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 ICAM5Q9UMF0 924 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 L3MBTL1Q9Y468 752 aa16.92■□□□□ 0.3
PTCD3-217ENST00000488801 UTP20O75691 2785 aaKnown RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 C7orf72A4D263 438 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 BBIP1A8MTZ0 92 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 NPIPA2E9PIF3 369 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 NPIPA3F8WFD2 350 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 PRRG2O14669 202 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 LRRTM2O43300 516 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 TRAPPC6AO75865 159 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 TPOP07202 933 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 BMP7P18075 431 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 SUMO3P55854 103 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 CHRNEQ04844 493 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 GPR68Q15743 365 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 ZNF630Q2M218 657 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 GLYR1Q49A26 553 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 RUNDC3AQ59EK9 446 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 CBLN3Q6UW01 205 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 PHF10Q8WUB8 498 aaKnown RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 SLC38A5Q8WUX1 472 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 PMM1Q92871 262 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 ZG16BQ96DA0 208 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 CGREF1Q99674 301 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 CCDC106Q9BWC9 280 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 A4GALTQ9NPC4 353 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 PNPLA3Q9NST1 481 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 TAS2R10Q9NYW0 307 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 TNFRSF10DQ9UBN6 386 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 SUCOQ9UBS9 1254 aaKnown RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 DKKL1Q9UK85 242 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 MEMO1Q9Y316 297 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 SLC6A5Q9Y345 797 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 CAPN7Q9Y6W3 813 aa16.91■□□□□ 0.3
PTCD3-217ENST00000488801 ASH1LQ9NR48 2969 aaKnown RBP16.91■□□□□ 0.3
PTCD3-217ENST00000488801 TRGV8A0A0C4DH27 118 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 SERINC4A6NH21 518 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 AGAP5A6NIR3 686 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 E9PLN8 166 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 ETV2O00321 342 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-217ENST00000488801 ACTL6AO96019 429 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 NUDT7P0C024 238 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 HPGDP15428 266 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 CHMP24386 653 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 CRATP43155 626 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 SKP2Q13309 424 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 MAPRE2Q15555 327 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 TRMT5Q32P41 509 aaKnown RBP16.9■□□□□ 0.3
PTCD3-217ENST00000488801 PLPPR5Q32ZL2 321 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 GXYLT1Q4G148 440 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 GPAT3Q53EU6 434 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 PRAMEF8Q5VWM4 474 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 PRAMEF7Q5VXH5 474 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 RTL6Q6ICC9 239 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 PIGWQ7Z7B1 504 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 FJX1Q86VR8 437 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 IFNEQ86WN2 208 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 MARVELD2Q8N4S9 558 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 TOR1AIP2Q8NFQ8 470 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 ARSGQ96EG1 525 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 ANKRD27Q96NW4 1050 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 TIMP4Q99727 224 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 VKORC1Q9BQB6 163 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 TP63Q9H3D4 680 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-217ENST00000488801 PTGES2Q9H7Z7 377 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 ARMCX1Q9P291 453 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 FAM215AQ9Y5M1 114 aa16.9■□□□□ 0.3
PTCD3-217ENST00000488801 C15orf38-AP3S2A0A0A6YYH1 394 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms