RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 REXO5Q96IC2 774 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 ZNF583Q96ND8 569 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 KCTD14Q9BQ13 255 aaPredicted RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 TREX2Q9BQ50 279 aaPredicted RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 HES7Q9BYE0 225 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 C1orf21Q9H246 121 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 SLC38A1Q9H2H9 487 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 ARMC7Q9H6L4 198 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 BCL2L10Q9HD36 194 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 FLRT3Q9NZU0 649 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 SUCOQ9UBS9 1254 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 B4GALT7Q9UBV7 327 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 IFT52Q9Y366 437 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 DOCK10Q96BY6 2186 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 A0A1W2PQD3 144 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 FAM220BPB1ANY3 271 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ALG1L2C9J202 215 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ACOT7O00154 380 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 NME4O00746 187 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 KIAA0513O60268 411 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 UGT2B17O75795 530 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ANGPTL1O95841 491 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 IFNA14P01570 189 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ETS2P15036 469 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ELAVL4P26378 380 aaKnown RBP9.41□□□□□ -0.9
SKA1-204ENST00000488454 AQP1P29972 269 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 PCGF2P35227 344 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 DNASE1L1P49184 302 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 GZMMP51124 257 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 VEZF1Q14119 521 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 TOMM20Q15388 145 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ADRM1Q16186 407 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ZSWIM7Q19AV6 140 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 DNAL1Q4LDG9 190 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 KLHL26Q53HC5 615 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 PDZK1Q5T2W1 519 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 BICRALQ6AI39 1079 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 C6orf89Q6UWU4 347 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 BNC2Q6ZN30 1099 aaPredicted RBP9.41□□□□□ -0.9
SKA1-204ENST00000488454 EIF3MQ7L2H7 374 aaKnown RBP9.41□□□□□ -0.9
SKA1-204ENST00000488454 OLIG3Q7RTU3 272 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 CALHM3Q86XJ0 350 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 PTOV1Q86YD1 416 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ZZZ3Q8IYH5 903 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 MICU2Q8IYU8 434 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ARHGAP24Q8N264 748 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 C10orf111Q8N326 155 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 OR4K17Q8NGC6 315 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 OR52P1PQ8NH57 321 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 FBXO27Q8NI29 283 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 SLC26A7Q8TE54 656 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 DUSP19Q8WTR2 217 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 TMEM41AQ96HV5 264 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ZNF597Q96LX8 424 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ZFP64Q9NPA5 681 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 TAS2R1Q9NYW7 299 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.41□□□□□ -0.9
SKA1-204ENST00000488454 PPP4R1LQ9P1A2 415 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ABCD2Q9UBJ2 740 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ANAPC2Q9UJX6 822 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 SLC13A4Q9UKG4 626 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 WIF1Q9Y5W5 379 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 ZZEF1O43149 2961 aa9.41□□□□□ -0.9
SKA1-204ENST00000488454 DSPP15924 2871 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 PRORSD1PA6NEY8 169 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 SERINC4A6NH21 518 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 AGAP5A6NIR3 686 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 NPIPB9F8W1W9 429 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 GNB5O14775 395 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 CBR3O75828 277 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 CYP7B1O75881 506 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 CSTAP01040 98 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 CPOXP36551 454 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 MAP2K3P46734 347 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 GSK3BP49841 420 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 PPIAP62937 165 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 KCNJ10P78508 379 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 ALDH6A1Q02252 535 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 GABPB1Q06547 395 aaPredicted RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 MAPK11Q15759 364 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 SPATS1Q496A3 300 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 LIN52Q52LA3 116 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 ZNF311Q5JNZ3 666 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 RPS26P11Q5JNZ5 115 aaPredicted RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 TIGD3Q6B0B8 471 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 FAM180AQ6UWF9 173 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 APOOLQ6UXV4 268 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 PATL1Q86TB9 770 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 SLC22A16Q86VW1 577 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 PLCZ1Q86YW0 608 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 ARMC8Q8IUR7 673 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 CMIPQ8IY22 773 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 CISD2Q8N5K1 135 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 RNF148Q8N7C7 305 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms