RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 AGRPO00253 132 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 WWP2O00308 870 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 P2RX6O15547 441 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ORC5O43913 435 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 GCM2O75603 506 aaPredicted RBP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 NUDT7P0C024 238 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PRKAR1AP10644 381 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ACPPP15309 386 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 TIA1P31483 386 aaKnown RBP eCLIP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CSF2RBP32927 897 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PCGF2P35227 344 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CDH12P55289 794 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 RAB8AP61006 207 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 MLLT11Q13015 90 aaPredicted RBP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 SNTA1Q13424 505 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 RNLSQ5VYX0 342 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 TRIQKQ629K1 86 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ASPGQ86U10 573 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 GHDCQ8N2G8 530 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 C19orf47Q8N9M1 422 aaKnown RBP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ZNF680Q8NEM1 530 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ATP6V1C2Q8NEY4 427 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PRSS33Q8NF86 280 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 SPPL2AQ8TCT8 520 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 FCRL1Q96LA6 429 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PPP1R3EQ9H7J1 279 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 GALNT9Q9HCQ5 603 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 LHX9Q9NQ69 397 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 C1GALT1Q9NS00 363 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 NLKQ9UBE8 527 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ENOPH1Q9UHY7 261 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CLCA3PQ9Y6N3 262 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 FAM240BA0A1B0GVZ2 78 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 H0YGG7 62 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 LYRM1O43325 122 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 ERI3O43414 337 aaKnown RBP12.77□□□□□ -0.36
COPS7B-221ENST00000488111 DUX1O43812 170 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 KLHL18O94889 574 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 HBQ1P09105 142 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 SLC2A2P11168 524 aaPredicted RBP12.77□□□□□ -0.36
COPS7B-221ENST00000488111 GPR3P46089 330 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 NUBP1P53384 320 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 ARF3P61204 181 aaPredicted RBP12.77□□□□□ -0.36
COPS7B-221ENST00000488111 SELENOWP63302 87 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 KIF18BQ86Y91 864 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 PHC2Q8IXK0 858 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 GPALPP1Q8IXQ4 340 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 OR52J3Q8NH60 311 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 MS4A6EQ96DS6 147 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 ZDHHC12Q96GR4 267 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 NUDT22Q9BRQ3 303 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 MED18Q9BUE0 208 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 MND1Q9BWT6 205 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 ANKRA2Q9H9E1 313 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 FAM86C1Q9NVL1 165 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.36
COPS7B-221ENST00000488111 CACNA1HO95180 2353 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 TSC22D2O75157 780 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 ENTPD6O75354 484 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-221ENST00000488111 PRPS1L1P21108 318 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 APEX1P27695 318 aaKnown RBP12.77□□□□□ -0.37
COPS7B-221ENST00000488111 BSGP35613 385 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 LIMS1P48059 325 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-221ENST00000488111 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
COPS7B-221ENST00000488111 SPEM2Q0P670 501 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 NCF4Q15080 339 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 UGT8Q16880 541 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 NANOGP1Q8N7R0 232 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 OR9Q1Q8NGQ5 310 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 ZCCHC10Q8TBK6 192 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 ATOH1Q92858 354 aaPredicted RBP12.77□□□□□ -0.37
COPS7B-221ENST00000488111 RGMAQ96B86 450 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.37
COPS7B-221ENST00000488111 TPT1P8Q9HAU6 139 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 AHSPQ9NZD4 102 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 COQ3Q9NZJ6 369 aa12.77□□□□□ -0.37
COPS7B-221ENST00000488111 PLOD3O60568 738 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TPOP07202 933 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 SNRPGP62308 76 aaKnown RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 CCL7P80098 99 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 MC1RQ01726 317 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 BAMBIQ13145 260 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 RNF44Q7L0R7 432 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TMPRSS9Q7Z410 1059 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 OR8H3Q8N146 312 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 SLC37A3Q8NCC5 494 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PROKR2Q8NFJ6 384 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 KLHL6Q8WZ60 621 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 RERGQ96A58 199 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms