RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 RNF6Q9Y252 685 aa2.05□□□□□ -2.08
R3HDM1-219ENST00000488035 CA5BQ9Y2D0 317 aa2.05□□□□□ -2.08
R3HDM1-219ENST00000488035 GMPPBQ9Y5P6 360 aa2.05□□□□□ -2.08
R3HDM1-219ENST00000488035 KIF25-AS1Q9Y6Z4 181 aa2.05□□□□□ -2.08
R3HDM1-219ENST00000488035 ZFP92A6NM28 416 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 H3BMQ9 156 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 TRIM3O75382 744 aaPredicted RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 UFL1O94874 794 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KRT6BP04259 564 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CPN1P15169 458 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ZBTB25P24278 435 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ATP5A1P25705 553 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ADSSP30520 456 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CA8P35219 290 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ACAA2P42765 397 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 GNPDA1P46926 289 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 OR3A4PP47883 348 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KRT6CP48668 564 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ACADVLP49748 655 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 OSTNP61366 133 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 NTHL1P78549 312 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KLHL30Q0D2K2 578 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 OVGP1Q12889 678 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KIAA0040Q15053 153 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 TEX44Q53QW1 395 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 OR8G2PQ6IF36 304 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 LRRC8BQ6P9F7 803 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CENPUQ71F23 418 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ARMCX2Q7L311 632 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 RAI1Q7Z5J4 1906 aaPredicted RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KIAA1328Q86T90 577 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CENPLQ8N0S6 344 aaPredicted RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ZSCAN4Q8NAM6 433 aaPredicted RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 OR5L2Q8NGL0 311 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 TRUB1Q8WWH5 349 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 RPL3LQ92901 407 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 DTNBP1Q96EV8 351 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 AKR1E2Q96JD6 320 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CNOT6LQ96LI5 555 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 C16orf45Q96MC5 204 aaPredicted RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KIR2DL4Q99706 377 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 THUMPD2Q9BTF0 503 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 C19orf24Q9BVV8 132 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 YTHDF1Q9BYJ9 559 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ZNF702PQ9H963 129 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 COG4Q9H9E3 785 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CAB39LQ9H9S4 337 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 PALMDQ9NP74 551 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 SLC35D1Q9NTN3 355 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 MRPL39Q9NYK5 338 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 IL17CQ9P0M4 197 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 APOBEC3BQ9UH17 382 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 KLHL21Q9UJP4 597 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 ISY1Q9ULR0 285 aaKnown RBP2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 CHMP2BQ9UQN3 213 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 PPIAL4AQ9Y536 164 aa2.04□□□□□ -2.08
R3HDM1-219ENST00000488035 TDRD6O60522 2096 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ANKRD30BQ9BXX2 1392 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 SF3B1O75533 1304 aaKnown RBP eCLIP2.03□□□□□ -2.082e-6■■■■■ 94.9
R3HDM1-219ENST00000488035 LOC100131303A0A0U1RQF7 123 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 EPOPA6NHQ4 379 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ZNF705EA8MWA4 302 aaPredicted RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 E7ENQ6 273 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 OR7A17O14581 309 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 OR1F1O43749 312 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ANP32DO95626 131 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 LY6G6DO95868 133 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 CA1P00915 261 aaPredicted RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 IGHV3-23P01764 117 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 HSPB1P04792 205 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 HEXBP07686 556 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ASNSP08243 561 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 HBQ1P09105 142 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 H2AFZP0C0S5 128 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 EPB41P11171 864 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 KRT13P13646 458 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 H2AFXP16104 143 aaPredicted RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 TNNI3P19429 210 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 DRD5P21918 477 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ADORA2BP29275 332 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 HPDP32754 393 aaPredicted RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 RPS8P62241 208 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 MRPS11P82912 194 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ELP6Q0PNE2 266 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 CUL1Q13616 776 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 LAGE3Q14657 143 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 PRR4Q16378 134 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 SLC5A12Q1EHB4 618 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 ISXQ2M1V0 245 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 CCDC57Q2TAC2 916 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 NCR3LG1Q68D85 454 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 PYHIN1Q6K0P9 492 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 SCYL2Q6P3W7 929 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 APOBEC3FQ8IUX4 373 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 DENND6BQ8NEG7 585 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 OR2T34Q8NGX1 318 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 NUS1Q96E22 293 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 SDSLQ96GA7 329 aa2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 CELF6Q96J87 481 aaKnown RBP2.03□□□□□ -2.08
R3HDM1-219ENST00000488035 PLEKHF1Q96S99 279 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms