RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 HEXBP07686 556 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 PIPP12273 146 aaPredicted RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 POU2F1P14859 743 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 TBXA2RP21731 343 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 GIPRP48546 466 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 SMSP52788 366 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 PNLIPRP2P54317 469 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CTBP2P56545 445 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 E2F1Q01094 437 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 PLAURQ03405 335 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 PRKCDQ05655 676 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 OCLNQ16625 522 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 TMEM44Q2T9K0 475 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 PHF19Q5T6S3 580 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 FNDC7Q5VTL7 733 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 C1orf189Q5VU69 101 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 RPL13AP3Q6NVV1 102 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 MRPL14Q6P1L8 145 aaKnown RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 TMEM205Q6UW68 189 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 ISLR2Q6UXK2 745 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 SLC29A4Q7RTT9 530 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 HMGN2P46Q86SG4 172 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 SLC34A3Q8N130 599 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 FAM26EQ8N5C1 309 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 OR4N2Q8NGD1 307 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 OR2I1PQ8NGU4 316 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 NUBPLQ8TB37 319 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 DNAJA4Q8WW22 397 aaPredicted RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CNOT9Q92600 299 aaKnown RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 OSTF1Q92882 214 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 MYDGFQ969H8 173 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CLIP3Q96DZ5 547 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CTRCQ99895 268 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 ZNF426Q9BUY5 554 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 NUDT9Q9BW91 350 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 TEX12Q9BXU0 123 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 POLDIP3Q9BY77 421 aaKnown RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 OR8D2Q9GZM6 311 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 POLR1BQ9H9Y6 1135 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 MED17Q9NVC6 651 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CLN6Q9NWW5 311 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 IL20Q9NYY1 176 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 AKAP7Q9P0M2 348 aaPredicted RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CTSFQ9UBX1 484 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 C19orf25Q9UFG5 118 aaPredicted RBP10.73□□□□□ -0.69
PRKCB-207ENST00000486868 PSORS1C1Q9UIG5 152 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 CEPT1Q9Y6K0 416 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 COMMD3-BMI1R4GMX3 469 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 TRIOO75962 3097 aa10.73□□□□□ -0.69
PRKCB-207ENST00000486868 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 UNC13CQ8NB66 2214 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ASXL3Q9C0F0 2248 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ZDBF2Q9HCK1 2354 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 OR2W5A6NFC9 320 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 EFCAB10A6NFE3 127 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 SAGE2PA6NJ88 616 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 CLDN24A6NM45 220 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 CLCA1A8K7I4 914 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 MEN1O00255 615 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 RGS10O43665 173 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 TSPAN2O60636 221 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 FAM20BO75063 409 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 SEC14L2O76054 403 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 HTR1AP08908 422 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ZNF806P0C7X5 589 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 NAGAP17050 411 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 PCMT1P22061 227 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 HTR2AP28223 471 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 FMO3P31513 532 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 KRT20P35900 424 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 IDH2P48735 452 aaKnown RBP10.72□□□□□ -0.69
PRKCB-207ENST00000486868 EFNA3P52797 238 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 EMP2P54851 167 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 EFNB1P98172 346 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 RNLSQ5VYX0 342 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 GTF2IRD2BQ6EKJ0 949 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 XAF1Q6GPH4 301 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ULK3Q6PHR2 472 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 CASP12Q6UXS9 341 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 LINC00114Q6XXX2 140 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 RBM44Q6ZP01 1051 aaKnown RBP10.72□□□□□ -0.69
PRKCB-207ENST00000486868 TMPRSS11FQ6ZWK6 438 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 NUP54Q7Z3B4 507 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 PRICKLE2Q7Z3G6 844 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ANKRD37Q7Z713 158 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 GTF2IRD2Q86UP8 949 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 NKAIN4Q8IVV8 208 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 POGLUT1Q8NBL1 392 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 SLC38A9Q8NBW4 561 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ZNF540Q8NDQ6 660 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 NFAM1Q8NET5 270 aaPredicted RBP10.72□□□□□ -0.69
PRKCB-207ENST00000486868 OR13F1Q8NGS4 319 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 C9orf43Q8TAL5 461 aaPredicted RBP10.72□□□□□ -0.69
PRKCB-207ENST00000486868 RHBDD1Q8TEB9 315 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 TMEM239Q8WW34 195 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 METTL21AQ8WXB1 218 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 FCGR1BQ92637 280 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 MUL1Q969V5 352 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms