RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 USP27XA6NNY8 438 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SYCE1LA8MT33 242 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SUPT3HB4E1H0 165 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 H0YJX3 145 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF701M0R085 212 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PGRMC1O00264 195 aaKnown RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 TXNDC9O14530 226 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 ADAM10O14672 748 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 GSTA4O15217 222 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 VPS26AO75436 327 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PDE9AO76083 593 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 OR6B1O95007 311 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 HOXD4P09016 255 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 GSTA2P09210 222 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 STAG3L2P0CL84 134 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 MSR1P21757 451 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PSMB4P28070 264 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 RBL1P28749 1068 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 CMPK1P30085 196 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 CHRNB4P30926 498 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 ARL1P40616 181 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SLC26A3P40879 764 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 GPR4P46093 362 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 CLDN8P56748 225 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 LINC00310P59036 64 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SKP1P63208 163 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 OC90Q02509 493 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PDZK1IP1Q13113 114 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 STX5Q13190 355 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 MYBPHQ13203 477 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 TMED2Q15363 201 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 OR1C1Q15619 314 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 UAP1Q16222 522 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SLC18A3Q16572 532 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SGCBQ16585 318 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PRTGQ2VWP7 1150 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 BTBD16Q32M84 506 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 DCST1Q5T197 706 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SLC35F1Q5T1Q4 408 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 CARD17Q5XLA6 110 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 C18orf63Q68DL7 685 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PLAG1Q6DJT9 500 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 FRMPD2BQ6IN97 320 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SLC25A25Q6KCM7 469 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 H3F3CQ6NXT2 135 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 TTC33Q6PID6 262 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 NAPRTQ6XQN6 538 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 C3P1Q6ZMU1 363 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 COLCA1Q6ZS62 124 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 BHLHA15Q7RTS1 189 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 FAM122BQ7Z309 247 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 CCDC103Q8IW40 242 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PIANPQ8IYJ0 282 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 RCOR2Q8IZ40 523 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 OR4N4Q8N0Y3 316 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 BEST3Q8N1M1 668 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 MDS2Q8NDY4 140 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SRFBP1Q8NEF9 429 aaKnown RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 ELP5Q8TE02 316 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 MMABQ96EY8 250 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SAT2Q96F10 170 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SLC35A4Q96G79 324 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SCMH1Q96GD3 660 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 SPATA13Q96N96 652 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 IL17FQ96PD4 163 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 TRIM51Q9BSJ1 452 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 MRPS30Q9NP92 439 aaKnown RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 ZDHHC18Q9NUE0 388 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 FAM118AQ9NWS6 357 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 RHBDL2Q9NX52 303 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 IMPACTQ9P2X3 320 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 ERVK-18Q9QC07 812 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PLEKHA6Q9Y2H5 1048 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PRSS21Q9Y6M0 314 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 PHF3Q92576 2039 aaKnown RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF407Q9C0G0 2248 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 hCG_1818297A0A087WSY0 165 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 TRBV2A0A0J9YWF9 115 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 OR14I1A6ND48 311 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 HELTA6NFD8 242 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 H0YGG7 62 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 APOC4-APOC2K7ER74 178 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 LGALS8O00214 317 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PSTPIP1O43586 416 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GPC4O75487 556 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SLCO2B1O94956 709 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF205O95201 554 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SNAPINO95295 136 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 APOC2P02655 101 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 MT-ND5P03915 603 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SP1P08047 785 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PRSS56P0CW18 603 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 OR8G3PP0DMU2 310 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 NPPBP16860 134 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 CDH2P19022 906 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 NCF2P19878 526 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 NT5EP21589 574 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 DNASE1P24855 282 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 AVPR1BP47901 424 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 AGTR2P50052 363 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms